260c24487a0ce4e3e145687e6a1ba65c812f67d5 kuhn Tue May 26 09:28:38 2020 -0700 releasing new video: Browser Basics, Part Three. tweaks to training page diff --git src/hg/htdocs/training/index.html src/hg/htdocs/training/index.html index 0159676..3d26f61 100755 --- src/hg/htdocs/training/index.html +++ src/hg/htdocs/training/index.html @@ -7,108 +7,108 @@ <h1>Getting Help with the UCSC Genome Browser</h1> <div class="warn-note" style="border:2px solid #9e5900;padding:5px 20px;background-color:#e8ebf7;"> <p> <span style="font-weight:bold;color:#c70000;"> <strong><a href="http://bit.ly/ucscTraining" target="_blank">Host</a> a Genome Browser Workshop!</strong> <a href="trainingMap.html">Map</a></span></p> <p> Do you suspect that there is a lot more to the Genome Browser than you have been using? Timeslots are available to host a Genome Browser workshop at your institution. Thanks to the funding support of NHGRI, we are able to offer hands-on Genome Browser training onsite at your institution at very affordable prices, tailored to your audience's level of expertise. <strong><a href="http://bit.ly/ucscTraining" target="_blank">Host</a></strong> — <b><font - color = red>NOTE: virtual tutorials are available while coronavirus limits travel. Use the "host" link to contact us.</font></b> + color = red>NOTE: virtual tutorials are available while coronavirus limits travel. Use the + <strong><a href="http://bit.ly/ucscTraining" + target="_blank"> "Host" </a> </strong> + link to contact us.</font></b> </p> <p> For more information or to submit a request to host a workshop, please visit our <a href="http://bit.ly/ucscTraining" target="_blank">sign-up page</a>.</p> <p><span style="font-weight:bold;color:#c70000;"> <strong>Can't host?</strong></span> Catch one of our training sessions in your area:</p> <table class="gbsNoBorder"> <!-- stored for later Contact <A HREF="mailto:ucscgbtraining@soe.ucsc.edu">ucscgbtraining@soe.ucsc.edu</A> for access. --> <!-- above address is ucscgbtraining at soe.ucsc.edu --> <tr> - <td>May 25-27, 2020 </td> + <td>May 28, 2020</td> <td> - <a href = "http://isv.variome.org/" - target = _blank>Variant Detection 2020</A>. Piran, Slovenia. + "Grigore T. Popa" University of Medicine and Pharmacy. + Iasi, Romania. <b><font color = red> — cancelled - <a href = "http://genome.ucsc.edu/cgi-bin/hgTracks?db=wuhCor1" target = _blank>coronavirus</a></font></b> </td> </tr> <tr> - <td>May 28, 2020</td> + <td>June 7, 2020</td> <td> - "Grigore T. Popa" University of Medicine and Pharmacy. - Iasi, Romania. - <b><font color = red> — cancelled - - <a href = "http://genome.ucsc.edu/cgi-bin/hgTracks?db=wuhCor1" - target = _blank>coronavirus</a></font></b> + <del>ESHG Berlin</del> + <a href = "https://genome.ucsc.edu/cgi-bin/hgTracks?db=wuhCor1" + target = _blank>coronavirus</a></font></b>: + <a href = "https://2020.eshg.org/index.php/programme/live-events-2/#Sunday" + target = _blank>now virtual</a> </td> </tr> <!-- FUTURE: --> <tr> <td> further:</td> <td> <!-- new row: <br> --> - <del>ESHG Berlin</del> - <a href = "https://2020.eshg.org/index.php/programme/sunday/#W05" - target = _blank>now virtual</a> - | <del>Brno Czechia</del> - | NHGRI + | <del>NHGRI</del> - | <a href = "https://www.jax.org/education-and-learning/education-calendar/2020/07-july/human-and-mammalian-genetics-and-genomics-the-61st-mckusick-short-course" - target = _blank>McKusick course</a> + | <del>McKusick course</del> + <a href = "https://www.jax.org/education-and-learning/education-calendar/2020/07-july/human-and-mammalian-genetics-and-genomics-the-61st-mckusick-short-course" + target = _blank>now virtual</a> | <a href = "https://www.hgsa.org.au/about/HGSA2020-destination-venue" - target = _blank>HGSA</a> Adelaide - > 2021. + target = _blank>HGSA</a> Adelaide - > 2021 | <del>Perth</del> - <br> + | <del>Kansas City</del> - > 2021 - Kansas City - > 2021 + <br> | <del><a href = "http://veptc.variome.org/home.html" target = _blank>VEPTC</a> Barcelona</del> - > 2021 | <a href = "https://www.nsgc.org/conference" target = _blank>NSGC</a> Nashville | <a href = "http://ashg.org/meetings/2020meeting" target = _blank>ASHG</a> San Diego | <a href = "https://www.acmg.net/ACMG/ACMG/Education/Meetings_and_Events.aspx" target = _blank>ACMG 2021</a> Los Angeles </td> </tr> @@ -130,52 +130,59 @@ <p> Visit our <a href="https://www.youtube.com/channel/UCQnUJepyNOw0p8s2otX4RYQ/videos" target="_blank" style="background-color:yellow;"> YouTube channel</a> or use the links below. </p> <!-- Left column of vids --> <!-- # this div tag indents, but I don't want it to!!!! --> <div class="row"> <div class="col-md-6"> <h2 id="videos" style="background-color:#dde6ee; color:black;"> Video tutorials </h2> <ul> <li> - <img class="gbsInlineImg" style="border:0px" src="../images/new.jpg" alt="new icon"> Coronavirus Basics: <a class="toc" href="https://www.youtube.com/watch?v=Ee6h0xyZDOM&feature=youtu.be&list=UUQnUJepyNOw0p8s2otX4RYQ" target=_blank> Coronavirus Browser SARS-CoV-2</a>. [ <a href = "vids/transcript20.pdf" target = _blank>transcript</a> ]</li> <li> Browser Basics, Part One: <a class="toc" href="https://www.youtube.com/watch?v=NBDMNv2KFik&feature=youtu.be&list=UUQnUJepyNOw0p8s2otX4RYQ" target=_blank> Getting around in the Browser</a>. [ <a href = "vids/transcript17.pdf" target = _blank>transcript</a> ]</li> <li> Browser Basics, Part Two: <a class="toc" href="https://www.youtube.com/watch?v=cYys5iXN0NY&feature=youtu.be&list=UUQnUJepyNOw0p8s2otX4RYQ" target=_blank> Configuring the Browser</a>. [ <a href = "vids/transcript18.pdf" target = _blank>transcript</a> ]</li> <li> + <img class="gbsInlineImg" style="border:0px" src="../images/new.jpg" alt="new icon"> + Browser Basics, Part Three: + <a class="toc" + href="https://www.youtube.com/watch?v=I25Q136d6NU&feature=youtu.be&list=UUQnUJepyNOw0p8s2otX4RYQ" + target=_blank> Configuring the Browser + DNA navigation</a>. + [ <a href = "vids/transcript19.pdf" target = _blank>transcript</a> ]</li> + + <li> <a class="toc" href="https://www.youtube.com/watch?v=d5rHBLXwraM&feature=youtu.be&feature=player_detailpage&v=8ATcoDTOc0g&list=UUQnUJepyNOw0p8s2otX4RYQ" target=_blank>Saving and sharing sessions</a> in the Browser. [ <a href = "vids/transcript16.pdf" target = _blank>transcript</a> ]</li> <li> <a class="toc" href="https://www.youtube.com/watch?v=jKix2B3hwnw&feature=youtu.be&feature=player_detailpage&v=8ATcoDTOc0g&list=UUQnUJepyNOw0p8s2otX4RYQ" target=_blank>Controlling visibility of data tracks</a> in the Browser. [ <a href = "vids/transcript15.pdf" target = _blank>transcript</a> ]</li> <li> Using the isPCR tool (<a class="toc" href="https://youtu.be/U8_QYwmdGYU?feature=player_detailpage&v=8ATcoDTOc0g&list=UUQnUJepyNOw0p8s2otX4RYQ" target=_blank>isPCR</a>) in the UCSC Genome Browser. @@ -187,44 +194,45 @@ target=_blank>dbSNP resources</a> in the UCSC Genome Browser database. [ <a href = "vids/transcript13.pdf" target = _blank>transcript</a> ]</li> <li> Using the UCSC Genome Browser <a class="toc" href="https://www.youtube.com/watch?feature=player_detailpage&v=8ATcoDTOc0g&list=UUQnUJepyNOw0p8s2otX4RYQ" target=_blank>Data Integrator</a>. [ <a href = "vids/transcript12.pdf" target = _blank>transcript</a> ]</li> <li> Finding a <a href="https://www.youtube.com/watch?feature=player_detailpage&v=RjB_N1GpT0U&list=UUQnUJepyNOw0p8s2otX4RYQ" target="_blank">list of genes</a> in a region. [ <a href = "vids/transcript01.pdf" target = _blank>transcript</a> ]</li> - <li> - Finding <a href = "https://www.youtube.com/watch?v=gK8B6sjzhmM&list=UUQnUJepyNOw0p8s2otX4RYQ" - target="_blank">exon numbers</a>. - [ <a href = "vids/transcript02.pdf" target = _blank>transcript</a> ]</li> - </ul> </div> <!-- Right column of vids --> <div class="col-md-6" style="padding-left: 0px;"> <h2 style="background-color:#dde6ee; color:black"> Video tutorials </h2> <ul> <li> + Finding <a href = "https://www.youtube.com/watch?v=gK8B6sjzhmM&list=UUQnUJepyNOw0p8s2otX4RYQ" + target="_blank">exon numbers</a>. + [ <a href = "vids/transcript02.pdf" target = _blank>transcript</a> ]</li> + + + <li> Finding all <a href = "https://www.youtube.com/watch?v=Y_cQ3JkhsUQ&list=UUQnUJepyNOw0p8s2otX4RYQ" target="_blank">SNPs in a gene</a>. [ <a href = "vids/transcript03.pdf" target = _blank>transcript</a> ]</li> <li> Finding <a href = "https://www.youtube.com/watch?v=ZqxlBF3vqhY&list=UUQnUJepyNOw0p8s2otX4RYQ" target="_blank">SNPs upstream</a> from a gene. [ <a href = "vids/transcript04.pdf" target = _blank>transcript</a> ]</li> <li> Find <a href = "https://www.youtube.com/watch?v=RQZ4EeYS6Zk&list=UUQnUJepyNOw0p8s2otX4RYQ" target="_blank">which tables belong to a data track</a>. [ <a href = "vids/transcript06.pdf" target = _blank>transcript</a> ]</li> <li>