92dbf17afa86167de018d4887e746322ee117b5e lrnassar Mon May 25 15:29:13 2020 -0700 Accidentally committed test parameters when dealing with merge conflict, no RM diff --git src/utils/trackDbIndexBb/tests/makefile src/utils/trackDbIndexBb/tests/makefile index 56caff2..74d9ff9 100644 --- src/utils/trackDbIndexBb/tests/makefile +++ src/utils/trackDbIndexBb/tests/makefile @@ -1,17 +1,16 @@ kentSrc = ../../.. include ../../../inc/common.mk all: - #mkdir -p out + mkdir -p out # alas, our automated tests cannot output anything to stderr, as otherwise emails will be sent - python2 trackDbIndexBb -t uniformDnase -r in/trackDb.smallExample.txt -c in/hg19.chrom.sizes -o out/ -p /cluster/bin/bedtools/bedtools -m metadata -s lab 2> /dev/null + python2 ${DESTBINDIR}/trackDbIndexBb -t uniformDnase -r in/trackDb.smallExample.txt -c in/hg19.chrom.sizes -o out/ -p /cluster/bin/bedtools/bedtools -m metadata -s lab 2> /dev/null diff out/uniformDnase.multiBed.bb expected/uniformDnase.multiBed.bb diff out/uniformDnase.multiBedSources.tab expected/uniformDnase.multiBedSources.tab - python3 trackDbIndexBb -t uniformDnase -r in/trackDb.smallExample.txt -c in/hg19.chrom.sizes -o out/ -p /cluster/bin/bedtools/bedtools -m metadata -s lab 2> /dev/null + python3 ${DESTBINDIR}/trackDbIndexBb -t uniformDnase -r in/trackDb.smallExample.txt -c in/hg19.chrom.sizes -o out/ -p /cluster/bin/bedtools/bedtools -m metadata -s lab 2> /dev/null diff out/uniformDnase.multiBed.bb expected/uniformDnase.multiBed.bb diff out/uniformDnase.multiBedSources.tab expected/uniformDnase.multiBedSources.tab - rm -f out/* clean: rm -f out/*