e46073f856770bdfef4f7637eea8f9f9297aa139
chmalee
  Tue Nov 19 15:57:08 2019 -0800
Initial commit of new track type vcfPhased trio. A line with ticks, one
per haplotype per sample in the VCF, as specified by trackDb variables.

diff --git src/hg/hgTracks/hgTracks.h src/hg/hgTracks/hgTracks.h
index ba3b751..3fb8c55 100644
--- src/hg/hgTracks/hgTracks.h
+++ src/hg/hgTracks/hgTracks.h
@@ -1011,30 +1011,33 @@
 /* Make track group for chain-based snake alignment. */
 
 void chainMethods(struct track *track, struct trackDb *tdb,
                                 int wordCount, char *words[]);
 /* Make track group for chain alignment. */
 
 void netMethods(struct track *tg);
 /* Make track group for chain/net alignment. */
 
 void mafMethods(struct track *tg);
 /* Make track group for maf multiple alignment. */
 
 void bamMethods(struct track *track);
 /* Methods for BAM alignment files. */
 
+void vcfPhasedMethods(struct track *track);
+/* Load items from a VCF of one individuals phased genotypes */
+
 void vcfTabixMethods(struct track *track);
 /* Methods for Variant Call Format compressed & indexed by tabix. */
 
 void vcfMethods(struct track *track);
 /* Methods for Variant Call Format. */
 
 void altGraphXMethods(struct track *tg);
 /* setup special methods for altGraphX track */
 
 void wabaMethods(struct track *tg);
 /* Return track with fields shared by waba-based
  * alignment tracks filled in. */
 
 void axtMethods(struct track *tg, char *otherDb);
 /* Make track group for axt alignments. */