315f8c88b06685bbacdf27400292e247ec027ea7 kuhn Mon May 11 17:42:16 2020 -0700 releasing video about new coronavirus video diff --git src/hg/htdocs/goldenPath/newsarch.html src/hg/htdocs/goldenPath/newsarch.html index 6a12001..9bf6746 100755 --- src/hg/htdocs/goldenPath/newsarch.html +++ src/hg/htdocs/goldenPath/newsarch.html @@ -40,30 +40,57 @@ <div class="col-sm-3"> <ul> <li><a href="#2005">2005 News</a></li> <li><a href="#2004">2004 News</a></li> <li><a href="#2003">2003 News</a></li> <li><a href="#2002">2002 News</a></li> <li><a href="#2001">2001 News</a></li> </ul> </div> </div> </div> <!-- ============= 2020 archived news ============= --> <a name="2020"></a> +<a name="051220"></a> +<h2>May 12, 2020 New video: Coronavirus Browser SARS CoV-2 </h2> +<p> +We are pleased to announce the release of a +<a href = +"https://www.youtube.com/watch?v=Ee6h0xyZDOM&feature=youtu.be&list=UUQnUJepyNOw0p8s2otX4RYQ" +target = _blank>new video</a> on our +<a href = "https://www.youtube.com/channel/UCQnUJepyNOw0p8s2otX4RYQ/videos" +target = _blank>YouTube channel</a>, designed to help make the Browser more +accessible to those not usually using the Genome Browser, espcially virologists +and molecular biologists developing assays and vaccines. The video highlights +many features that regular Browser users may already know, but in the +context of SARS-CoV-2 genome assembly. The Browser coronavirus tour highlights +RT-PCR data, UniProt , crowd-sourced data, T-cell Reactive epitopes and +comparative genomics data for viral isolates from around the world and those +infecting other vertebrates. +</p> + +<p> +<img src = "../images/titleVid20.jpg" WIDTH = 458 HEIGHT = 258> +</p> + +<p> +Thanks to Robert Kuhn for production and Max Haeussler and Jason Fernandes +for input. +</p> + <a name="050620"></a> <h2>May 6, 2020 Problematic Regions for NGS or Sanger sequencing or very variable regions</h2> <p> We are happy to announce a new data track which describes <a target="_blank" href="../../cgi-bin/hgTrackUi?db=hg19&g=problematic">Problematic Regions for NGS or Sanger sequencing or very variable regions</a> in the human assembly (hg19/GRCh37).</p> <p> This track shows genomic regions known to cause artefacts for common sequencing downstream analyses, like alignment, variant, or peak calling. This track is composed of 12 subtracks with underlying data imported from these projects:</p> <ul> <li> <a target="_blank" href="../../cgi-bin/hgGateway">UCSC</a> - manually curated annotations of fixed sequences, alternate haplotypes, unplaced contigs, pseudo-autosomal regions, and mitochondria that can yield