9429d8a90724a8ed4476c8757d5dd3399c360ba5 kuhn Wed May 13 11:46:56 2020 -0700 adding some missing hyphens diff --git src/hg/htdocs/goldenPath/newsarch.html src/hg/htdocs/goldenPath/newsarch.html index 688ee9e..95424bd 100755 --- src/hg/htdocs/goldenPath/newsarch.html +++ src/hg/htdocs/goldenPath/newsarch.html @@ -96,31 +96,31 @@ This track shows genomic regions known to cause artefacts for common sequencing downstream analyses, like alignment, variant, or peak calling. This track is composed of 12 subtracks with underlying data imported from these projects:</p> <ul> <li> <a target="_blank" href="../../cgi-bin/hgGateway">UCSC</a> - manually curated annotations of fixed sequences, alternate haplotypes, unplaced contigs, pseudo-autosomal regions, and mitochondria that can yield alignments with low quality mapping scores and discordant read pairs. </li> <li> <a target="_blank" href="https://personal.broadinstitute.org/anshul/projects/encode/rawdata/blacklists/hg19- blacklist-README.pdf">ENCODE Blacklist</a> - comprehensive set of regions that have anomalous, unstructured or high signal in next-generation sequencing experiments.</li> <li> <a target="_blank" href="https://www.ncbi.nlm.nih.gov/variation/tools/get-rm/">NCBI GeT-RM</a> - highly homologous -gene and exon level regions that are difficult or impossible to analyze with standard Sanger or NGS +gene- and exon-level regions that are difficult or impossible to analyze with standard Sanger or NGS approaches and are relevant to current clinical testing.</li> <li> <a target="_blank" href="https://www.nist.gov/programs-projects/genome-bottle">Genome-in-a-Bottle</a> - defined regions where it is difficult to make a confident call, due to low coverage, systematic sequencing errors, local alignment problems, etc.</li> </ul> <p> We would like to thank Anna Benet-Pages, Max Haeussler, Angie Hinrichs, and Daniel Schmelter at the UCSC Genome Browser for planning, building, and testing these tracks. </p> <a name="050420"></a> <h2>May 4, 2020 May 4th data release for SARS-CoV-2 genome browser</h2> <p>