9be83456f0cc46e79ebc460d75fe61ab9198c0c0
lrnassar
  Tue May 12 11:00:18 2020 -0700
Adding new util for indexing bigBeds, adding make tests and to list of user utilts refs #24479

diff --git src/utils/trackDbIndexBb/tests/makefile src/utils/trackDbIndexBb/tests/makefile
new file mode 100644
index 0000000..74d9ff9
--- /dev/null
+++ src/utils/trackDbIndexBb/tests/makefile
@@ -0,0 +1,16 @@
+kentSrc = ../../..
+include ../../../inc/common.mk
+
+
+all:
+	mkdir -p out
+	# alas, our automated tests cannot output anything to stderr, as otherwise emails will be sent
+	python2 ${DESTBINDIR}/trackDbIndexBb -t uniformDnase -r in/trackDb.smallExample.txt -c in/hg19.chrom.sizes -o out/ -p /cluster/bin/bedtools/bedtools -m metadata -s lab 2> /dev/null
+	diff out/uniformDnase.multiBed.bb expected/uniformDnase.multiBed.bb
+	diff out/uniformDnase.multiBedSources.tab expected/uniformDnase.multiBedSources.tab
+	python3 ${DESTBINDIR}/trackDbIndexBb -t uniformDnase -r in/trackDb.smallExample.txt -c in/hg19.chrom.sizes -o out/ -p /cluster/bin/bedtools/bedtools -m metadata -s lab 2> /dev/null
+	diff out/uniformDnase.multiBed.bb expected/uniformDnase.multiBed.bb
+	diff out/uniformDnase.multiBedSources.tab expected/uniformDnase.multiBedSources.tab
+
+clean:
+	rm -f out/*