41df9b35fc8555ab404240a74723731bbe3af7ce brianlee Tue May 19 22:43:41 2020 -0700 Changing funding message on covid homepage as requested by Ann and Alexis on Browser description page too diff --git src/hg/htdocs/covid19.html src/hg/htdocs/covid19.html index 4effe3e..804754e 100755 --- src/hg/htdocs/covid19.html +++ src/hg/htdocs/covid19.html @@ -1,176 +1,176 @@

COVID-19 Pandemic Resources at UCSC Updated:   May 11, 2020

The SARS-CoV-2 coronavirus emerged in December 2019 as a novel human pathogen causing a severe acute respiratory syndrome (COVID-19). In the following months, the disease spread internationally and was declared a pandemic by the World Health Organization on March 11, 2020.

We at the UC Santa Cruz Genomics Institute are responding to the urgency of supporting biomedical research aimed at developing therapeutics and a vaccine for this devastating illness by fast-tracking the UCSC Genome Browser for SARS-Cov-2 and incorporating relevant biomedical datasets such as single-cell lung gene expression into the UCSC Cell Browser. A manuscript describing this work, The UCSC SARS-CoV-2 Genome Browser, is available from the bioRxiv preprint server.

The UCSC Genome Browser is a publicly available web resource serving the research community since July 2000. Both the Genome Browser and UCSC Cell Browser are funded by the NIH National Human Genome Research Institute. In addition to this funding, the COVID-19 projects here are funded by generous supporters including: an anonymous donor; Pat and Roland Rebele; Eric and Wendy Schmidt by recommendation of the Schmidt Futures program; and the University of California Office of the President (OCOP). +href="https://www.universityofcalifornia.edu/uc-system/office-of-the-president">UCOP). To contribute, click here.

COVID-19 transmission as of May 8, 2020, from Nextstrain
COVID-19 transmission as of May 8, 2020
Latest situation report from Nextstrain.org

UCSC Genome Browser view of SARS-CoV-2 genomic datasets


Video tutorial: Using the coronavirus browser.

UCSC Cell Browser view of lung gene expression datasets

Related publications and data resources