b99d9ad5adfa3176196acb5f4ace0c98f9742646 hiram Fri May 22 14:13:48 2020 -0700 eliminate other hub indexes for VGP page index refs #25555 diff --git src/hg/makeDb/doc/asmHubs/mkAsmStats.pl src/hg/makeDb/doc/asmHubs/mkAsmStats.pl index eaafb3c..85afdfa 100755 --- src/hg/makeDb/doc/asmHubs/mkAsmStats.pl +++ src/hg/makeDb/doc/asmHubs/mkAsmStats.pl @@ -120,49 +120,64 @@ ############################################################################## sub endTable() { my $commaNuc = commify($overallNucleotides); my $commaSeqCount = commify($overallSeqCount); my $commaGapSize = commify($overallGapSize); my $commaGapCount = commify($overallGapCount); my $percentDone = 100.0 * $asmCount / $assemblyTotal; my $doneMsg = ""; if ($asmCount < $assemblyTotal) { $doneMsg = sprintf(" (%d build completed, %.2f %% finished)", $asmCount, $percentDone); } if ($assemblyTotal > 1) { - print <<"END" - + print " TOTALS:total assembly count ${assemblyTotal}${doneMsg} $commaSeqCount $commaNuc $commaGapCount $commaGapSize   - + +"; + + # try extra column headers as last row for this very large index page + if ($vgpIndex) { + print "count + common name
link to genome browser + scientific name
and data download + NCBI assembly + sequence
countgenome size
nucleotides + gap
countunknown bases
(gap size sum)masking
percent + +"; + } + + print " + -END -} else { - print <<"END" +"; + } else { + print " -END -} +"; + } # $assemblyTotal <= 1 } # sub endTable() ############################################################################## ### end the HTML output ############################################################################## sub endHtml() { # do not print these links for VGP index if ((0 == $vgpIndex) && ($asmHubName ne "viral")) { printf "

\n\n"; printf "\n"; printf "\n"; printf "\n"; printf "\n";
Additional hubs with collections of assemblies
Assembly hubs index pages: PrimatesMammals