95efc27edf24bba8d0c7e53d2ef4aead59982826
braney
  Mon Jun 15 18:29:39 2020 -0700
Merging in our gencode merge code to master branch

diff --git src/hg/inc/gencodeTranscriptSupport.h src/hg/inc/gencodeTranscriptSupport.h
new file mode 100644
index 0000000..07b95bf
--- /dev/null
+++ src/hg/inc/gencodeTranscriptSupport.h
@@ -0,0 +1,65 @@
+/* gencodeTranscriptSupport.h was originally generated by the autoSql program, which also 
+ * generated gencodeTranscriptSupport.c and gencodeTranscriptSupport.sql.  This header links the database and
+ * the RAM representation of objects. */
+
+#ifndef GENCODETRANSCRIPTSUPPORT_H
+#define GENCODETRANSCRIPTSUPPORT_H
+
+#define GENCODETRANSCRIPTSUPPORT_NUM_COLS 3
+
+extern char *gencodeTranscriptSupportCommaSepFieldNames;
+
+struct gencodeTranscriptSupport
+/* GENCODE transcript support from other datasets */
+    {
+    struct gencodeTranscriptSupport *next;  /* Next in singly linked list. */
+    char *transcriptId;	/* GENCODE transcript identifier */
+    char *seqId;	/* Identifier of sequence supporting transcript */
+    char *seqSrc;	/* Source of supporting sequence */
+    };
+
+void gencodeTranscriptSupportStaticLoad(char **row, struct gencodeTranscriptSupport *ret);
+/* Load a row from gencodeTranscriptSupport table into ret.  The contents of ret will
+ * be replaced at the next call to this function. */
+
+struct gencodeTranscriptSupport *gencodeTranscriptSupportLoad(char **row);
+/* Load a gencodeTranscriptSupport from row fetched with select * from gencodeTranscriptSupport
+ * from database.  Dispose of this with gencodeTranscriptSupportFree(). */
+
+struct gencodeTranscriptSupport *gencodeTranscriptSupportLoadAll(char *fileName);
+/* Load all gencodeTranscriptSupport from whitespace-separated file.
+ * Dispose of this with gencodeTranscriptSupportFreeList(). */
+
+struct gencodeTranscriptSupport *gencodeTranscriptSupportLoadAllByChar(char *fileName, char chopper);
+/* Load all gencodeTranscriptSupport from chopper separated file.
+ * Dispose of this with gencodeTranscriptSupportFreeList(). */
+
+#define gencodeTranscriptSupportLoadAllByTab(a) gencodeTranscriptSupportLoadAllByChar(a, '\t');
+/* Load all gencodeTranscriptSupport from tab separated file.
+ * Dispose of this with gencodeTranscriptSupportFreeList(). */
+
+struct gencodeTranscriptSupport *gencodeTranscriptSupportCommaIn(char **pS, struct gencodeTranscriptSupport *ret);
+/* Create a gencodeTranscriptSupport out of a comma separated string. 
+ * This will fill in ret if non-null, otherwise will
+ * return a new gencodeTranscriptSupport */
+
+void gencodeTranscriptSupportFree(struct gencodeTranscriptSupport **pEl);
+/* Free a single dynamically allocated gencodeTranscriptSupport such as created
+ * with gencodeTranscriptSupportLoad(). */
+
+void gencodeTranscriptSupportFreeList(struct gencodeTranscriptSupport **pList);
+/* Free a list of dynamically allocated gencodeTranscriptSupport's */
+
+void gencodeTranscriptSupportOutput(struct gencodeTranscriptSupport *el, FILE *f, char sep, char lastSep);
+/* Print out gencodeTranscriptSupport.  Separate fields with sep. Follow last field with lastSep. */
+
+#define gencodeTranscriptSupportTabOut(el,f) gencodeTranscriptSupportOutput(el,f,'\t','\n');
+/* Print out gencodeTranscriptSupport as a line in a tab-separated file. */
+
+#define gencodeTranscriptSupportCommaOut(el,f) gencodeTranscriptSupportOutput(el,f,',',',');
+/* Print out gencodeTranscriptSupport as a comma separated list including final comma. */
+
+/* -------------------------------- End autoSql Generated Code -------------------------------- */
+
+#endif /* GENCODETRANSCRIPTSUPPORT_H */
+