95efc27edf24bba8d0c7e53d2ef4aead59982826 braney Mon Jun 15 18:29:39 2020 -0700 Merging in our gencode merge code to master branch diff --git src/hg/lib/gencodeExonSupport.sql src/hg/lib/gencodeExonSupport.sql new file mode 100644 index 0000000..5ec7adc --- /dev/null +++ src/hg/lib/gencodeExonSupport.sql @@ -0,0 +1,17 @@ +# gencodeExonSupport.sql was originally generated by the autoSql program, which also +# generated gencodeExonSupport.c and gencodeExonSupport.h. This creates the database representation of +# an object which can be loaded and saved from RAM in a fairly +# automatic way. + +#GENCODE exon support from other datasets +CREATE TABLE gencodeExonSupport ( + transcriptId varchar(255) not null, # GENCODE transcript identifier + seqId varchar(255) not null, # Identifier of sequence supporting transcript + seqSrc varchar(255) not null, # Source of supporting sequence + exonId varchar(255) not null, # GENCODE exon identifier (not stable) + chrom varchar(255) not null, # Chromosome + chromStart int unsigned not null, # Start position in chromosome + chromEnd int unsigned not null, # End position in chromosome + #Indices + index(transcriptId) +);