1a40e3021a59b8139fd74aa9aa6cc0146e6273d8 hiram Fri Jun 19 09:06:35 2020 -0700 now using unique hub.txt files for each subset refs #25555 diff --git src/hg/makeDb/doc/asmHubs/asmHubs.mk src/hg/makeDb/doc/asmHubs/asmHubs.mk index 9d450cf..e57a8f3 100644 --- src/hg/makeDb/doc/asmHubs/asmHubs.mk +++ src/hg/makeDb/doc/asmHubs/asmHubs.mk @@ -30,32 +30,32 @@ rm -f ${destDir}/${statsName}.html ${destDir}/${testStatsName}.html ${toolsDir}/mkAsmStats.pl ${Name} ${name} ${orderList} > ${destDir}/${statsName}.html sed -e "s/hgdownload.soe/hgdownload-test.gi/g; s/index.html/${testIndexName}.html/; s#/${statsName}#/${testStatsName}#; s#${dataName}.html#${testDataName}.html#;" ${destDir}/${statsName}.html > ${destDir}/${testStatsName}.html chmod +x ${destDir}/${statsName}.html ${destDir}/${testStatsName}.html # trackData makes different tables for the test vs. production version # mkHubIndex.pl and mkAsmStats.pl should do this too . . . TBD trackData:: ${toolsDir}/trackData.pl ${Name} ${name} ${orderList} > ${destDir}/${dataName}.html ${toolsDir}/trackData.pl -test ${Name} ${name} ${orderList} | sed -e "s#testIndex.html#${testIndexName}.html#; s#testAsmStats.html#${testStatsName}.html#;" > ${destDir}/${testDataName}.html chmod +x ${destDir}/${dataName}.html chmod +x ${destDir}/${testDataName}.html hubTxt: rm -f ${destDir}/${hubFile}.txt - sed -e "s#index.html#${indexName}.html#; s#genomes.txt#${genomesTxt}.txt#;" ${srcDir}/hub.txt > ${destDir}/${hubFile}.txt - sed -e 's/index.html/${testIndexName}.html/; s#genomes.txt#${genomesTxt}.txt#;' ${srcDir}/hub.txt > ${destDir}/${testHubFile}.txt + sed -e "s#index.html#${indexName}.html#; s#genomes.txt#${genomesTxt}.txt#;" ${srcDir}/${hubTxtFile} > ${destDir}/${hubFile}.txt + sed -e 's/index.html/${testIndexName}.html/; s#genomes.txt#${genomesTxt}.txt#;' ${srcDir}/${hubTxtFile} > ${destDir}/${testHubFile}.txt # all hubs have the same set of groups, no need for any name customization groupsTxt: rm -f ${destDir}/groups.txt cp -p ${toolsDir}/groups.txt ${destDir}/groups.txt clean:: rm -f ${destDir}/${hubFile}.txt rm -f ${destDir}/${testHubFile}.txt rm -f ${destDir}/groups.txt rm -f ${destDir}/${genomesTxt}.txt rm -f ${destDir}/${indexName}.html rm -f ${destDir}/${testIndexName}.html rm -f ${destDir}/${statsName}.html rm -f ${destDir}/${testStatsName}.html