ec085390d79da88eac31afc7e9b4efb40c5e554b hiram Wed Jun 17 12:32:56 2020 -0700 the VGP class is sharks not snakes refs #25555 diff --git src/hg/makeDb/doc/vgpAsmHub/vgp.taxId.asmId.class.txt src/hg/makeDb/doc/vgpAsmHub/vgp.taxId.asmId.class.txt index a3f863e..86807cf 100644 --- src/hg/makeDb/doc/vgpAsmHub/vgp.taxId.asmId.class.txt +++ src/hg/makeDb/doc/vgpAsmHub/vgp.taxId.asmId.class.txt @@ -11,32 +11,32 @@ 63155 GCA_007364235.1_fArcCen1_v1.h fish 1825980 GCA_007399395.1_rGopEvg1_v1.alt reptiles 61383 GCA_007474575.1_mLynCan4_v1.alt mammals 28689 GCA_008658355.1_bAlcTor1_alternate birds 28689 GCA_008658365.1_bAlcTor1_primary birds 9771 GCA_008658375.1_mBalMus1_alternate mammals 42100 GCA_008692045.1_mPhoSin1.alt mammals 59729 GCA_008822115.3_bTaeGut2.mat.v3 birds 59729 GCA_008822125.1_bTaeGut2pat birds 1196302 GCA_009651025.1_bCorMon1.alt birds 9704 GCA_009762295.1_mZalCal1.alt mammals 9704 GCA_009762305.1_mZalCal1.pri mammals 1203425 GCA_009762535.1_fNotCel1.pri fish 1203425 GCA_009762545.1_fNotCel1.alt fish 27794 GCA_009762595.1_rDerCor1.alt reptiles -685728 GCA_009764475.1_sPriPec2.pri snakes -685728 GCA_009764485.1_sPriPec2.alt snakes +685728 GCA_009764475.1_sPriPec2.pri sharks +685728 GCA_009764485.1_sPriPec2.alt sharks 121530 GCA_009764505.1_bTauEry1.alt birds 135433 GCA_009764545.1_bGeoTri1.alt birds 27794 GCA_009764565.1_rDerCor1.pri reptiles 135433 GCA_009764595.1_bGeoTri1.pri birds 121530 GCA_009769465.1_bTauEry1.pri birds 8869 GCA_009769485.1_bCygOlo1.alt birds 240206 GCA_009769505.1_bPteGut1.alt birds 8103 GCA_009769515.1_fCycLum1.alt fish 240206 GCA_009769525.1_bPteGut1.pri birds 8103 GCA_009769545.1_fCycLum1.pri fish 153643 GCA_009769595.1_bBucAby1.alt birds 153643 GCA_009769605.1_bBucAby1.pri birds 8869 GCA_009769625.1_bCygOlo1.pri birds 35005 GCA_009769695.1_rThaEle1.alt reptiles 54380 GCA_009819485.1_bCarCri1.alt birds @@ -49,32 +49,32 @@ 48155 GCA_009819655.1_bSylAtr1.pri birds 8267 GCA_009819705.1_fHipHip1.pri fish 48155 GCA_009819715.1_bSylAtr1.alt birds 8267 GCA_009819745.1_fHipHip1.alt fish 9218 GCA_009819775.1_bPhoRub2.pri birds 9218 GCA_009819805.1_bPhoRub2.alt birds 54380 GCA_009819825.1_bCarCri1.pri birds 219594 GCA_009819845.1_bAytFul2.alt birds 409849 GCA_009829125.1_fPerMag1.pri fish 409849 GCA_009829135.1_fPerMag1.alt fish 36723 GCA_009829165.1_mMusErm1.alt mammals 296741 GCA_009829205.1_bChiLan1.alt birds 59729 GCA_009859025.1_bTaeGut2.p.v1.alt birds 59729 GCA_009859065.2_bTaeGut2.pri.v2 birds 9771 GCA_009873245.2_mBalMus1.v2 mammals -386614 GCA_010909765.1_sAmbRad1.pri snakes -386614 GCA_010909745.1_sAmbRad1.alt snakes +386614 GCA_010909765.1_sAmbRad1.pri sharks +386614 GCA_010909745.1_sAmbRad1.alt sharks 7757 GCA_010993595.1_kPetMar1.alt otherChordates 8010 GCA_011004835.1_fEsoLuc1.alt fish 8010 GCA_011004845.1_fEsoLuc1.pri fish 100784 GCA_011004865.1_bBalReg1.alt birds 100784 GCA_011004875.1_bBalReg1.pri birds 9483 GCA_011078405.1_mCalJac1.mat primates 9483 GCA_011100535.1_mCalJac1.pat primates 9483 GCA_011100555.1_mCalJac1.pat.X primates 9337 GCA_011100635.1_mTriVul1.pri mammals 9337 GCA_011100645.1_mTriVul1.alt mammals 61156 GCA_011750645.1_mArvNil1.mat mammals 61156 GCA_011762505.1_mArvNil1.pat.X mammals 9739 GCA_011762515.1_mTurTru1.pat mammals 9739 GCA_011762535.1_mTurTru1.mat mammals 61156 GCA_011762545.1_mArvNil1.pat mammals @@ -129,31 +129,31 @@ 89673 GCF_004126475.1_mPhyDis1_v1.p mammals 63155 GCF_007364275.1_fArcCen1 fish 63155 GCA_007364275.2_fArcCen1 fish 1825980 GCF_007399415.2_rGopEvg1_v1.p reptiles 61383 GCF_007474595.1_mLynCan4_v1.p mammals 42100 GCF_008692025.1_mPhoSin1.pri mammals 59729 GCA_003957565.2_bTaeGut1_v1.p birds 59729 GCF_008822105.2_bTaeGut2.pat.W.v2 birds 1196302 GCF_009650955.1_bCorMon1.pri birds 35005 GCF_009769535.1_rThaEle1.pri reptiles 80427 GCF_009819535.1_rLacAgi1.pri reptiles 219594 GCF_009819795.1_bAytFul2.pri birds 91951 GCF_009819885.1_bCatUst1.pri birds 296741 GCF_009829145.1_bChiLan1.pri birds 36723 GCF_009829155.1_mMusErm1.Pri mammals -386614 GCF_010909765.1_sAmbRad1.pri snakes +386614 GCF_010909765.1_sAmbRad1.pri sharks 7757 GCF_010993605.1_kPetMar1.pri otherChordates 8154 GCF_900246225.1_fAstCal1.2 fish 64144 GCF_900324465.2_fAnaTes1.2 fish 205130 GCF_900324485.2_fMasArm1.2 fish 223781 GCF_900496995.1_bAquChr1.2 birds 56716 GCF_900634415.1_fCotGob3.1 fish 210632 GCF_900634625.1_fParRan2.1 fish 441366 GCF_900634775.1_fGouWil2.1 fish 158456 GCF_900634795.2_fBetSpl5.2 fish 299321 GCF_900700375.1_fDenClu1.1 fish 27687 GCF_900747795.1_fErpCal1.1 fish 8175 GCF_900880675.1_fSpaAur1.1 fish 173247 GCF_900963305.1_fEcheNa1.1 fish 113540 GCF_900964775.1_fSclFor1.1 fish 31033 GCF_901000725.2_fTakRub1.2 fish