4e7d82cb16cd4cea93698834b637815cd74c7960
hiram
  Mon Jun 15 17:35:53 2020 -0700
adding definitions for panPan3 chainNet refs #25720

diff --git src/hg/makeDb/trackDb/trackDb.chainNet.primates.ra src/hg/makeDb/trackDb/trackDb.chainNet.primates.ra
index aa71b6d..5bc28e7 100644
--- src/hg/makeDb/trackDb/trackDb.chainNet.primates.ra
+++ src/hg/makeDb/trackDb/trackDb.chainNet.primates.ra
@@ -1101,30 +1101,84 @@
     track chainNetSaiBol1Viewnet
     shortLabel Net
     view net
     visibility dense
     parent chainNetSaiBol1
 
         track netSaiBol1
         parent chainNetSaiBol1Viewnet
         subGroups view=net
         shortLabel $o_Organism Net
         longLabel $o_Organism ($o_date) Alignment Net
         type netAlign saiBol1 chainSaiBol1
         html chainNet
 
 ################################################################
+# panPan3 - Bonobo - Pan paniscus - primate - GCF_013052645.1 Mhudiblu_PPA_v0
+################################################################
+track chainNetPanPan3
+compositeTrack on
+shortLabel $o_Organism Chain/Net
+longLabel $o_Organism ($o_date), Chain and Net Alignments
+subGroup1 view Views chain=Chain net=Net
+dragAndDrop subTracks
+visibility hide
+group compGeno
+noInherit on
+priority 215.30
+color 0,0,0
+altColor 255,255,0
+type bed 3
+sortOrder view=+
+matrix 16 90,-330,-236,-356,-330,100,-318,-236,-236,-318,100,-330,-356,-236,-330,90
+matrixHeader A, C, G, T
+otherDb panPan3
+chainMinScore 3000
+chainLinearGap medium
+spectrum on
+html chainNet
+
+    track chainNetPanPan3Viewchain
+    shortLabel Chain
+    view chain
+    visibility pack
+    parent chainNetPanPan3
+    spectrum on
+
+        track chainPanPan3
+        parent chainNetPanPan3Viewchain
+        subGroups view=chain
+        shortLabel $o_Organism Chain
+        longLabel $o_Organism ($o_date) Chained Alignments
+        type chain panPan3
+        html chainNet
+
+    track chainNetPanPan3Viewnet
+    shortLabel Net
+    view net
+    visibility dense
+    parent chainNetPanPan3
+
+        track netPanPan3
+        parent chainNetPanPan3Viewnet
+        subGroups view=net
+        shortLabel $o_Organism Net
+        longLabel $o_Organism ($o_date) Alignment Net
+        type netAlign panPan3 chainPanPan3
+        html chainNet
+
+################################################################
 # panPan2 - Bonobo - Pan paniscus - primate - primate - 245
 ################################################################
 track chainNetPanPan2
 compositeTrack on
 shortLabel $o_Organism Chain/Net
 longLabel $o_Organism ($o_date), Chain and Net Alignments
 subGroup1 view Views chain=Chain net=Net
 dragAndDrop subTracks
 visibility hide
 group compGeno
 noInherit on
 priority 215.30
 color 0,0,0
 altColor 255,255,0
 type bed 3