f60979fd1b38862306b6060da3a00b3db632c9f5 brianlee Wed Jun 3 11:59:58 2020 -0700 Updating link to hub to be relative to machine on covid19.html page diff --git src/hg/htdocs/covid19.html src/hg/htdocs/covid19.html index 3ec3962..2edf16e 100755 --- src/hg/htdocs/covid19.html +++ src/hg/htdocs/covid19.html @@ -1,196 +1,196 @@

COVID-19 Pandemic Resources at UCSC Updated:   June 1, 2020

The SARS-CoV-2 coronavirus emerged in December 2019 as a novel human pathogen causing a severe acute respiratory syndrome (COVID-19). In the following months, the disease spread internationally and was declared a pandemic by the World Health Organization on March 11, 2020.

We at the UC Santa Cruz Genomics Institute are responding to the urgency of supporting biomedical research aimed at developing therapeutics and a vaccine for this devastating illness by fast-tracking the UCSC Genome Browser for SARS-Cov-2 and incorporating relevant biomedical datasets such as single-cell lung gene expression into the UCSC Cell Browser. A manuscript describing this work, The UCSC SARS-CoV-2 Genome Browser, is available from the bioRxiv preprint server.

COVID-19 transmission as of May 30, 2020, from Nextstrain
COVID-19 transmission as of May 30, 2020
 Latest situation report from Nextstrain.org

UCSC Genome Browser view of SARS-CoV-2 genomic datasets


Video tutorial: Using the coronavirus browser.

UCSC Cell Browser view of lung gene expression datasets

News

Funding

The UCSC Genome Browser is a publicly available web resource serving the research community since July 2000. Both the Genome Browser and UCSC Cell Browser are funded by the NIH National Human Genome Research Institute. In addition to this funding, the COVID-19 projects here are funded by generous supporters including: several anonymous donors; Pat and Roland Rebele; Eric and Wendy Schmidt by recommendation of the Schmidt Futures program; the Center for Information Technology Research in the Interest of Society (CITRIS); and the University of California Office of the President (UCOP). To contribute, click here.