441bd60f9de5d7ab206028f5610788fb61e2d253 hiram Mon Jun 1 14:22:41 2020 -0700 trying out a chain net track on an assembly hub refs #25625 diff --git src/hg/makeDb/trackDb/trackDb.chainNet.asmHub.ra src/hg/makeDb/trackDb/trackDb.chainNet.asmHub.ra new file mode 100644 index 0000000..1638bc7 --- /dev/null +++ src/hg/makeDb/trackDb/trackDb.chainNet.asmHub.ra @@ -0,0 +1,55 @@ +################################################################ +# GCA_901343595v1_MONAX5 - woodchuck - Marmota monax - mammal +################################################################ +track chainNetGCA_901343595v1 +compositeTrack on +shortLabel $o_Organism Chain/Net +longLabel $o_Organism ($o_date), Chain and Net Alignments +subGroup1 view Views chain=Chain net=Net +dragAndDrop subTracks +visibility hide +group compGeno +noInherit on +priority 200.3 +color 0,0,0 +altColor 255,255,0 +type bed 3 +sortOrder view=+ +matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91 +matrixHeader A, C, G, T +otherDb GCA_901343595v1 +chainMinScore 3000 +chainLinearGap medium +spectrum on +html chainNet + + track chainNetGCA_901343595v1Viewchain + shortLabel Chain + view chain + visibility pack + parent chainNetGCA_901343595v1 + spectrum on + + track chainGCA_901343595v1_MONAX5 + parent chainNetGCA_901343595v1Viewchain + subGroups view=chain + shortLabel $o_Organism Chain + longLabel $o_Organism ($o_date) Chained Alignments + type chain GCA_901343595v1 + html chainNet + + track chainNetGCA_901343595v1Viewnet + shortLabel Net + view net + visibility dense + parent chainNetGCA_901343595v1 + + track netGCA_901343595v1_MONAX5 + parent chainNetGCA_901343595v1Viewnet + subGroups view=net + shortLabel $o_Organism Net + longLabel $o_Organism ($o_date) Alignment Net + type netAlign GCA_901343595v1 chainGCA_901343595v1_MONAX5 + html chainNet + +################################################################