94d9d0495ac3ff8446552a7ee48cf7bfd889be3d hiram Fri Jun 12 11:04:38 2020 -0700 catching up trackDb source tree files refs #25720 diff --git src/hg/utils/automation/makeGenomeDb.pl src/hg/utils/automation/makeGenomeDb.pl index 33378ac..f3bb47c 100755 --- src/hg/utils/automation/makeGenomeDb.pl +++ src/hg/utils/automation/makeGenomeDb.pl @@ -1377,30 +1377,32 @@ and makes *suggested* modifications. Checking in modified files, and adding new files, is left up to the user in case this script has made some wrong guesses about proper names and locations. _EOF_ ; my $bossScript = new HgRemoteScript("$scriptDir/makeTrackDb.csh", $dbHost, $runDir, $whatItDoes, $CONFIG); $bossScript->add(<<_EOF_ # These directories are necessary for running make in trackDb: $HgAutomate::git archive --remote=git://genome-source.soe.ucsc.edu/kent.git \\ --prefix=kent/ HEAD src/hg/makeDb/trackDb/loadTracks \\ src/hg/makeDb/trackDb/$dbDbSpeciesDir \\ src/hg/makeDb/trackDb/trackDb.transMap.ra \\ src/hg/makeDb/trackDb/trackDb.chainNet.ra \\ +src/hg/makeDb/trackDb/trackDb.encode3.ra \\ +src/hg/makeDb/trackDb/trackDb.chainNet.asmHub.ra \\ src/hg/makeDb/trackDb/crisprAll.ra \\ src/hg/makeDb/trackDb/trackDb.chainNet.primates.ra \\ src/hg/makeDb/trackDb/trackDb.chainNet.other.ra \\ src/hg/makeDb/trackDb/trackDb.chainNet.euarchontoglires.ra \\ src/hg/makeDb/trackDb/trackDb.chainNet.laurasiatheria.ra \\ src/hg/makeDb/trackDb/trackDb.chainNet.afrotheria.ra \\ src/hg/makeDb/trackDb/trackDb.chainNet.mammal.ra \\ src/hg/makeDb/trackDb/trackDb.chainNet.birds.ra \\ src/hg/makeDb/trackDb/trackDb.chainNet.sarcopterygii.ra \\ src/hg/makeDb/trackDb/trackDb.chainNet.fish.ra \\ src/hg/makeDb/trackDb/trackDb.chainNet.insects.ra \\ src/hg/makeDb/trackDb/trackDb.chainNet.nematode.ra \\ src/hg/makeDb/trackDb/chainNetPetMar1.ra \\ src/hg/makeDb/trackDb/chainNetPetMar2.ra \\ src/hg/makeDb/trackDb/trackDb.nt.ra \\