938e268e16bbcd34a1c98b98919df7d9869f588b
markd
  Fri Jun 5 18:57:32 2020 -0700
imported GENCODE V35 pre-release

diff --git src/hg/makeDb/outside/gencode/gencodeLoad.mk src/hg/makeDb/outside/gencode/gencodeLoad.mk
index e3fc820..cb37e47 100644
--- src/hg/makeDb/outside/gencode/gencodeLoad.mk
+++ src/hg/makeDb/outside/gencode/gencodeLoad.mk
@@ -23,62 +23,62 @@
 SHELL = bash -e
 export SHELLOPTS=pipefail
 
 ##
 # programs, etc
 ##
 mach = $(shell uname -m)
 
 ##
 # Release info and files from Sanger.
 # BEGIN EDIT THESE EACH RELEASE
 #
 # - ensemblPrevVersion is use to get chrom name mappings for pre-release,
 #   as this doesn't change between release.
 ##
-#db = hg38
-db = hg19
+db = hg38
+#db = hg19
 #db = mm10
-preRelease = no
-#preRelease = yes
+#preRelease = no
+preRelease = yes
 ifeq (${db},mm10)
     grcRefAssembly = GRCm38
     ver = M25
     prevVer = M24
     gencodeOrg = Gencode_mouse
     ftpReleaseSubdir = release_${ver}
     annGffTypeName = chr_patch_hapl_scaff.annotation
     ensemblVer = 100_38
     ensemblPrevVer = 99_38
     ensemblCDnaDb = mus_musculus_cdna_${ensemblPrevVer}
 else ifeq (${db},hg38)
     grcRefAssembly = GRCh38
-    ver = 34
-    prevVer = 33
+    ver = 35
+    prevVer = 34
     gencodeOrg = Gencode_human
     ftpReleaseSubdir = release_${ver}
     annGffTypeName = chr_patch_hapl_scaff.annotation
-    ensemblVer = 100_38
-    ensemblPrevVer = 99_38
+    ensemblVer = 101_38
+    ensemblPrevVer = 100_38
     ensemblCDnaDb = homo_sapiens_cdna_${ensemblPrevVer}
 else ifeq (${db},hg19)
     grcRefAssembly = GRCh37
-    verBase = 34
+    verBase = 35
     ver = ${verBase}lift37
     backmapTargetVer = 19
     ftpReleaseSubdir = release_${verBase}/GRCh37_mapping
-    prevVer = 34lift37
+    prevVer = 35lift37
     gencodeOrg = Gencode_human
     annGffTypeName = annotation
     ensemblVer = 74_37      # only used to get genome chromsome name mappings, don't change
     ensemblPrevVer = ${ensemblVer}  # doesn't change
     ensemblCDnaDb = homo_sapiens_cdna_${ensemblPrevVer}
     isBackmap = yes
 else
     $(error unimplement genome database: ${db})
 endif
 # END EDIT THESE EACH RELEASE
 
 
 ifeq (${preRelease},yes)
     # pre-release
     baseUrl = ftp://ftp.ebi.ac.uk/pub/databases/havana/gencode_pre