606a508ff4d9eef9075418e54448edc89c35aae2 angie Tue Jun 23 13:38:04 2020 -0700 Increase the max VCF track height to be more in line with the default maxItems-based maximumTrackHeight() (1000 items, 10px/item). diff --git src/hg/lib/vcfUi.c src/hg/lib/vcfUi.c index e275faf..61703d9 100644 --- src/hg/lib/vcfUi.c +++ src/hg/lib/vcfUi.c @@ -287,31 +287,31 @@ sameString(treeAngle, VCF_HAP_TREEANGLE_RECTANGLE)); printf("draw branches whose samples are all identical as [
\n"); puts(""); } static void vcfCfgHapClusterHeight(struct cart *cart, struct trackDb *tdb, struct vcfFile *vcff, char *name, boolean parentLevel) /* Let the user specify a height for the track. */ { if (vcff != NULL && vcff->genotypeCount > 1) { printf("%s sorting display height: \n", vcfHaplotypeOrSample(cart)); int cartHeight = cartOrTdbInt(cart, tdb, VCF_HAP_HEIGHT_VAR, VCF_DEFAULT_HAP_HEIGHT); char varName[1024]; safef(varName, sizeof(varName), "%s." VCF_HAP_HEIGHT_VAR, name); - cgiMakeIntVarInRange(varName, cartHeight, "Height (in pixels) of track", 5, "4", "2500"); + cgiMakeIntVarInRange(varName, cartHeight, "Height (in pixels) of track", 5, "4", "10000"); puts("
"); } } static void vcfCfgHapCluster(struct cart *cart, struct trackDb *tdb, struct vcfFile *vcff, char *name, boolean parentLevel) /* Show controls for haplotype-sorting display, which only makes sense to do when * the VCF file describes multiple genotypes. */ { char *hapOrSample = vcfHaplotypeOrSample(cart); printf("

%s sorting display

\n", hapOrSample); vcfCfgHapClusterEnable(cart, tdb, name, parentLevel); vcfCfgHaplotypeMethod(cart, tdb, name, parentLevel, vcff); vcfCfgHapClusterTreeAngle(cart, tdb, name, parentLevel); vcfCfgHapClusterColor(cart, tdb, name, parentLevel);