efd0ad08515edf8a962800e5f2b52f235cee2a9f
dschmelt
  Fri Jun 26 15:56:25 2020 -0700
Adding note about using RNA-seq for Max #25789

diff --git src/hg/makeDb/trackDb/refSeqComposite.html src/hg/makeDb/trackDb/refSeqComposite.html
index 11b49da..bf68fc8 100644
--- src/hg/makeDb/trackDb/refSeqComposite.html
+++ src/hg/makeDb/trackDb/refSeqComposite.html
@@ -1,22 +1,23 @@
 <h2>Description</h2>
 <p>
 The NCBI RefSeq Genes composite track shows $organism protein-coding and non-protein-coding
 genes taken from the NCBI RNA reference sequences collection (RefSeq). All subtracks use
 coordinates provided by RefSeq, except for the <em>UCSC RefSeq</em> track, which UCSC produces by
 realigning the RefSeq RNAs to the genome. This realignment may result in occasional differences
-between the annotation coordinates provided by UCSC and NCBI. See the 
+between the annotation coordinates provided by UCSC and NCBI. For RNA-seq analysis, we advise
+using NCBI aligned tables like RefSeq All or RefSeq Curated. See the 
 <a href="#methods">Methods</a> section for more details about how the different tracks were 
 created. </p>
 <p>
 Please visit NCBI's <a href="https://www.ncbi.nlm.nih.gov/projects/RefSeq/update.cgi"
 target="_blank">Feedback for Gene and Reference Sequences (RefSeq)</a> page to make suggestions, 
 submit additions and corrections, or ask for help concerning RefSeq records. </p>
 
 <p>
 For more information on the different gene tracks, see our <a target=_blank 
 href="/FAQ/FAQgenes.html">Genes FAQ</a>.</p>
 
 <h2>Display Conventions and Configuration</h2>
 <p>
 This track is a composite track that contains differing data sets.
 To show only a selected set of subtracks, uncheck the boxes next to the tracks that you wish to