d57e88e244a6f7372791a93f52b1f4b1628801ff braney Wed Jul 15 08:38:34 2020 -0700 oops.. another place that references gff.h diff --git src/hg/lib/tests/genePredTester.c src/hg/lib/tests/genePredTester.c index 15c4ff5..773b9e3 100644 --- src/hg/lib/tests/genePredTester.c +++ src/hg/lib/tests/genePredTester.c @@ -296,31 +296,31 @@ pslFreeList(&pslList); carefulClose(&outFh); hashFree(&cdsTbl); checkNumRows(pslFile, numRows); } void groupConvertWarn(char *gxfFile, boolean isGtf, struct gffGroup *group) /* issue a warning when a GxF group can't be converted to a genePred */ { struct gffLine *line; fprintf(stderr, "Warning: Can't convert %s to genePred: %s\n", (isGtf ? "GTF" : "GFF"), gxfFile); for (line = group->lineList; line != NULL; line = line->next) { - fprintf(stderr, "\t%s\t%s\t%s\t%d\t%d\t%g\t%c\t%c\t%s\t%s\t%s\t%d\n", + fprintf(stderr, "\t%s\t%s\t%s\t%ld\t%ld\t%g\t%c\t%c\t%s\t%s\t%s\t%d\n", line->seq, line->source, line->feature, line->start, line->end, line->score, line->strand, line->frame, line->group, line->geneId, line->exonId, line->exonNumber); } } void fromGxf(char *gxfFile, boolean isGtf) /* Implements the fromGff/fromGtf tasks */ { struct gffFile *gxf = gffRead(gxfFile); struct gffGroup *group; struct genePred *gp; int numRows = 0; FILE *outFh = NULL;