Commits for chmalee

v403_preview2 to v403_base (2020-08-17 to 2020-08-24) v403

942b9930eaefb78d4e542e4f27e956ceb7a3ee34 Mon Aug 17 15:54:38 2020 -0700

• Update decipher to bigBed, refs #25841
  • src/hg/utils/otto/decipher/buildDecipher - lines changed 35, context: html, text, full: html, text
  • src/hg/utils/otto/decipher/checkDecipher.sh - lines changed 17, context: html, text, full: html, text
  • src/hg/utils/otto/decipher/decipher.tables - lines changed 4, context: html, text, full: html, text
  • src/hg/utils/otto/decipher/makefile - lines changed 1, context: html, text, full: html, text

8fa80406a18bd1a3a5c3331d84d33e03971271e7 Tue Aug 18 12:28:21 2020 -0700

• Documenting VCF phased trio track, refs #26076
  • src/hg/htdocs/goldenPath/help/trackDb/trackDbDoc.html - lines changed 52, context: html, text, full: html, text
  • src/hg/htdocs/goldenPath/help/trackDb/trackDbHub.v2.html - lines changed 51, context: html, text, full: html, text
  • src/hg/htdocs/goldenPath/help/trackDb/trackDbLibrary.shtml - lines changed 65, context: html, text, full: html, text
  • src/hg/htdocs/goldenPath/help/vcf.html - lines changed 41, context: html, text, full: html, text
  • src/hg/htdocs/images/trioExample.png - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)

162bc86b24eb5186560aabb1c2eedf919602f89b Tue Aug 18 12:29:16 2020 -0700

• Forgot to commit helper script for turning decipher into bigBed, refs #25841
  • src/hg/utils/otto/decipher/processDecipher.py - lines changed 153, context: html, text, full: html, text

e6f37ac836c15aef886fd4d10af0ab23f17b4b86 Wed Aug 19 15:54:31 2020 -0700

• Add a note about NOT adding CGI variables to the end of the URL in addSessionLink as it breaks short links when they are available
  • src/hg/hgSession/hgSession.c - lines changed 3, context: html, text, full: html, text