90722fe965a89529d622dc70225dea8cf3924e32
chmalee
  Tue Aug 4 16:53:00 2020 -0700
Stage genome in a bottle trio vcf track, refs #25873

diff --git src/hg/makeDb/trackDb/human/trackDb.giab.ra src/hg/makeDb/trackDb/human/trackDb.giab.ra
new file mode 100644
index 0000000..0c2fd11
--- /dev/null
+++ src/hg/makeDb/trackDb/human/trackDb.giab.ra
@@ -0,0 +1,45 @@
+track giab
+shortLabel Genome In a Bottle
+longLabel Genome In a Bottle Structural Variants and Trios
+compositeTrack on
+visibility hide
+subGroup1 view Views trios=trios sv=Structural_Variants
+type bed 3
+group varRep
+
+    track triosView
+    shortLabel Genome In a Bottle Trios
+    longLabel Genome in a Bottle Ashkenazim and Chinese Trios
+    view trios
+    type vcfPhasedTrio
+    parent giab
+
+        track ashkenazimTrio
+        parent triosView
+        shortLabel Ashkenazim Trio
+        longLabel Genome In a Bottle Ashkenazim Trio
+        type vcfPhasedTrio
+        subGroups view=trios
+        bigDataUrl /gbdb/$D/giab/AshkenazimTrio/merged.vcf.gz
+        maxWindowToDraw 5000000
+        vcfUseAltSampleNames on
+        vcfDoFilter off
+        vcfDoQual off
+        vcfDoMaf off
+        vcfChildSample HG002|son
+        vcfParentSamples HG003|father,HG004|mother
+
+        track chineseTrio
+        parent triosView
+        shortLabel Chinese  Trio
+        longLabel Genome In a Bottle Chinese  Trio
+        type vcfPhasedTrio
+        subGroups view=trios
+        bigDataUrl /gbdb/$D/giab/ChineseTrio/merged.vcf.gz
+        maxWindowToDraw 5000000
+        vcfUseAltSampleNames on
+        vcfDoFilter off
+        vcfDoQual off
+        vcfDoMaf off
+        vcfChildSample HG005|son
+        vcfParentSamples HG006|father,HG007|mother