a1b107fdb30e455d3928a235e3f5d18cbc4f0d25 dschmelt Fri Aug 7 11:07:04 2020 -0700 Adding info refs #25984 diff --git src/hg/htdocs/goldenPath/newsarch.html src/hg/htdocs/goldenPath/newsarch.html index 9b6f242..6d1bf71 100755 --- src/hg/htdocs/goldenPath/newsarch.html +++ src/hg/htdocs/goldenPath/newsarch.html @@ -44,32 +44,33 @@ <li><a href="#2003">2003 News</a></li> <li><a href="#2002">2002 News</a></li> <li><a href="#2001">2001 News</a></li> </ul> </div> </div> </div> <!-- ============= 2020 archived news ============= --> <a name="2020"></a> <a name="080720"></a> <h2>Aug. 7 2020 Eight new data tracks for SARS-CoV-2 (COVID) </h2> <p> We are working hard to support the scientific effort against the COVID pandemic and are happy -to announce eight new data track annotations for the SARS-CoV-2 genome. -Like nearly all of our tracks, the data are open-access +to announce eight new annotation tracks on the SARS-CoV-2 genome. These datasets reveal information +about duplication regions, sequencing, gene identities, plasmid constructs, +protein contact sites, and variant distribution. Like nearly all of our tracks, the data are open-access and downloadable through our <a href="http://hgdownload.soe.ucsc.edu/downloads.html#SARS-CoV-2"> Downloads page</a> or <a href="../../cgi-bin/hgTables">Table Browser</a> page. More information on each of these datasets can be obtained by reading the data track descriptions linked below.</p> <ul> <li><a href="../../cgi-bin/hgTrackUi?db=wuhCor1&g=problematicSites">Problematic sites</a> shows regions that are ambiguous and may warrant caution or masking for analysis.</li> <li><a href="../../cgi-bin/hgTrackUi?db=wuhCor1&g=rapid">RAPID Primers</a> marks regions that were successfully used for Nanopore sequencing. </li> <li><a href="../../cgi-bin/hgTrackUi?db=wuhCor1&g=unipCov2AliSwissprot">UniProt proteins</a> was updated and displays protein sequences mapped to the SARS-CoV-2 genome.</li> <li><a href="../../cgi-bin/hgTrackUi?db=wuhCor1&g=phyloGenes">PhyloCSF Genes</a> shows curated SARS-CoV-2 protein-coding genes conserved within the Sarbecovirus subgenus as calculated with comparative genomics algorithms.</li> <li><a href="../../cgi-bin/hgTrackUi?db=wuhCor1&g=addgene">AddGene Plasmid Alignments</a>