c5ad86284bb8e2ae9012c00dc1d5a2ddf4573c82 brianlee Wed Aug 12 14:33:24 2020 -0700 Adding New Version section to refSeqFuncElems.hmtl to share Public Hub until new track made refs #26048 diff --git src/hg/makeDb/trackDb/refSeqFuncElems.html src/hg/makeDb/trackDb/refSeqFuncElems.html index b3893e2..3895e73 100644 --- src/hg/makeDb/trackDb/refSeqFuncElems.html +++ src/hg/makeDb/trackDb/refSeqFuncElems.html @@ -41,30 +41,38 @@ NCBI manually curated features in accordance with International Nucleotide Sequence Database Collaboration (INSDC) standards. Features that are supported by direct experimental evidence include at least one experiment qualifier with an evidence code (ECO ID) from the Evidence and Conclusion Ontology, and at least one citation from PubMed. Currently 971 distinct PubMed citations are included in this track. </p> <h2>Contact</h2> <p> This track was made with assistance from <a href="mailto:murphyte@ncbi. nlm. nih. gov" target="_blank">Terence Murphy</a> at NCBI.</p> +<h2>New Version Available</h2> +<p> +Several new enhancements to the RefSeq Functional Elements dataset are available as a Public Hub. +The hub can be found <a href="/cgi-bin/hgHubConnect?hubSearchTerms=RefSeqFE">on the Public Hub page</a>. +The track hub was prepared by Dr. Catherine M. Farrell, NCBI/NLM/NIH with further insights discussed +<a href="https://ncbiinsights.ncbi.nlm.nih.gov/2020/08/04/new-interaction-data-downloads-track-hub-refseq-functional-elements/" +target="_blank">in a related NCBI blog post</a>.</p> + <h2>References</h2> <p> Pruitt KD, Brown GR, Hiatt SM, Thibaud-Nissen F, Astashyn A, Ermolaeva O, Farrell CM, Hart J, Landrum MJ, McGarvey KM <em>et al</em>. <a href="https://academic.oup.com/nar/article/42/D1/D756/1051112/RefSeq-an-update-on-mammalian- reference-sequences" target="_blank">RefSeq: an update on mammalian reference sequences</a>. <em>Nucleic Acids Res</em>. 2014 Jan;42(Database issue):D756-63. PMID: <a href="https://www.ncbi.nlm.nih.gov/pubmed/24259432" target="_blank">24259432</a>; PMC: <a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3965018/" target="_blank">PMC3965018</a> </p> <p> Pruitt KD, Tatusova T, Maglott DR. <a href="https://academic.oup.com/nar/article/33/suppl_1/D501/2505241/NCBI-Reference-Sequence- RefSeq-a-curated-non" target="_blank">NCBI Reference Sequence (RefSeq): a curated non-redundant