598b456b9f994d9f13b10af35e81338d8afa9075
dschmelt
  Wed Sep 9 12:03:11 2020 -0700
Adding publication info refs #22678 #26195

diff --git src/hg/htdocs/covid19.html src/hg/htdocs/covid19.html
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@@ -84,72 +84,71 @@
               <li><a href="https://covid19atlas.cells.ucsc.edu" target="_blank">COVID-19 Cell Atlas</a>
               <li><a href="https://scarface.cells.ucsc.edu"
               target="_blank">COVID-19 SARS-CoV-2 and coronavirus-associated
               receptors and factors (SCARFs)</a>
               <li><a href="https://hca-lungmap-integrated.cells.ucsc.edu"
               target="_blank">HCA-LungMAP COVID-19 Integrated Analysis</a>
             </ul>
             <p><a href="https://cells.ucsc.edu/?bp=lung"
             target="blank">Other Lung datasets in the Cell Browser</a>
     </div>
 </div>
 
 <h2 id="news">News</h2>
 <ul>
 <li>
-</li>
 <b>August 7, 2020</b>: 
 <a target="_blank" href="https://genome.ucsc.edu/goldenPath/newsarch.html#080720">
 Eight new annotation tracks</a>, presenting information about 
 duplication regions, sequencing, gene identities, plasmid constructs, protein contact sites, 
-and variant distribution.
+and variant distribution.</li>
 <li>
 <b>July 7, 2020</b>: 
-Annotation tracks released: <a target="_blank" <a target="_blank" href="https://genome.ucsc.edu/goldenPath/newsarch.html#070720">
+Annotation tracks released: <a target="_blank" 
+href="https://genome.ucsc.edu/goldenPath/newsarch.html#070720">
 PhyloCSF (Codon Substitution Frequency), Microdeletions, and Human CoV</a>
 (multiple alignment of SARS-CoV-2, SARS-CoV-1, MERS, and three other human-infecting coronaviruses)
 </li>
 <li><b>May 29, 2020</b>: Public track hub 
 <a target="_blank" 
 href="http://ftp.ebi.ac.uk/pub/databases/gencode/covid19_trackhub/COVID19_Hub.html">
 GENCODE annotation of COVID-19 associated genes</a> released.
 View in <a target="_blank" 
 href="../cgi-bin/hgTracks?hubUrl=http://ftp.ebi.ac.uk/pub/databases/gencode/covid19_trackhub/hub.txt&genome=hg38&position=lastDbPos" >
 browser</a>. </li>
 
 <li><a target="_blank" href="goldenPath/newsarch.html#051220">Video:
 Coronavirus Browser SARS CoV-2</a></li>
 <li><a target="_blank" href="goldenPath/newsarch.html#050420">May
 data release for SARS-CoV-2 genome browser</a></li>
 <li><a target="_blank" href="goldenPath/newsarch.html#040320">April
 data release for SARS-CoV-2 genome browser</a></li>
 </ul>
 
 <h2 id="related">Related publications and data resources</h2>
 
 <ul>
-
+<li><a href="https://www.nature.com/articles/s41588-020-0700-8" target="_blank">
+The UCSC SARS-CoV-2 Genome Browser</a> <em>Nature Genetics</em></li> 
 <li> Preprints of research manuscripts:
     <a href="https://connect.biorxiv.org/relate/content/181" 
         target="_blank">BioRxiv/MedRxiv COVID-19 Collection</a> (all freely available)</li>
 <li><a target="_blank" href="https://pages.semanticscholar.org/coronavirus-research">COVID-19 Open Research Dataset</a> of scholarly literature</li>
 
 <li>
 GISAID 
 <a target="_blank" href="https://gisaid.org">the main repository of SARS-CoV-2 sequences</a> 
-(please see GISAID's  
- <a target="_blank" href="https://www.gisaid.org/registration/terms-of-use/">terms and conditions</a>)
 </li>
 
 <li>
 NIH Office of Data Science Strategy
 <a target="_blank" href="https://datascience.nih.gov/covid-19-open-access-resources">Open-Access Data and Computational Resources to Address COVID-19</a>
 </li>
 
 <li>
 European Molecular Biology Laboratory/European Bioinformatics Institute (EMBL-EBI) and partners:
 <a target="_blank" href="https://www.covid19dataportal.org/">
 COVID-19 Data Portal</a>
 </li>
 
 <li>
 China National Center for Bioinformation: