1fa0d91b193efa62568c3ab7f38db979e48eef90 jnavarr5 Fri Sep 11 11:11:52 2020 -0700 Announcing the UCSC LiftOver and NCBI Remap alignments for hg38 and hg19, refs #24449 diff --git src/hg/htdocs/goldenPath/newsarch.html src/hg/htdocs/goldenPath/newsarch.html index 1adde8f..4cfc283 100755 --- src/hg/htdocs/goldenPath/newsarch.html +++ src/hg/htdocs/goldenPath/newsarch.html @@ -40,30 +40,50 @@ <div class="col-sm-3"> <ul> <li><a href="#2005">2005 News</a></li> <li><a href="#2004">2004 News</a></li> <li><a href="#2003">2003 News</a></li> <li><a href="#2002">2002 News</a></li> <li><a href="#2001">2001 News</a></li> </ul> </div> </div> </div> <!-- ============= 2020 archived news ============= --> <a name="2020"></a> +<a name="091120"></a> +<h2>Sept. 11, 2020 UCSC LiftOver and NCBI Remap alignments for human (hg38/hg19)</h2> +<p> +We are proud to announce the release of UCSC LiftOver and NCBI Remap alignments for human +(<a href="../../cgi-bin/hgTracks?db=hg19&c=chrX&g=liftHg38">GRCh37/hg19</a> and +<a href="../../cgi-bin/hgTracks?db=hg38&c=chrX&g=liftHg19">GRCh38/hg38</a>). These alignments are +contained in a composite track with three subtracks, one for UCSC LiftOver and two for NCBI +alignments. +</p> +<ul> + <li>UCSC liftOver alignments to hg19/hg38</li> + <li>NCBI ReMap alignments to hg19/hg38</li> + <li>NCBI ReMap alignments to hg19/hg38, joined by axtChain</li> +</ul> +<p> +We would like to thank NCBI for making the ReMap data available and to Angie Hinrichs for the file +conversion. We would also like to thank Max Haeussler and Jairo Navarro for the development and +release of these tracks. +</p> + <a name="082820"></a> <h2>Aug. 28, 2020 New, chromosome-level Gorilla genome browser available (gorGor6) </h2> <p> We are happy to release a <a href="../../cgi-bin/hgTracks?db=gorGor6"> Genome Browser data visualization</a> for the much anticipated 2019 Gorilla genome. Thanks to the <a target="_blank" href="https://eichlerlab.gs.washington.edu/"> University of Washington</a> for releasing the high-quality assembly, to <a target="_blank" href="https://www.ncbi.nlm.nih.gov/refseq/"> NCBI RefSeq</a> for providing the RefSeq annotations, as well as Hiram Clawson and Daniel Schmelter of the UCSC Genome Browser group for their work in creating and releasing this Genome Browser.</p> <h3>About the assembly (gorGor6):</h3> <ul> <li><b>UCSC Genome Browser assembly ID:</b> <a href="../../cgi-bin/hgGateway?db=gorGor6">