555adca1c2689e0dd7dbfe9ac33af162b860be56 chmalee Mon Aug 31 09:43:14 2020 -0700 Turn on search for dbVar track, refs #25424 diff --git src/hg/makeDb/trackDb/human/trackDb.dbVar.ra src/hg/makeDb/trackDb/human/trackDb.dbVar.ra index 25da6e9..00cbea1 100644 --- src/hg/makeDb/trackDb/human/trackDb.dbVar.ra +++ src/hg/makeDb/trackDb/human/trackDb.dbVar.ra @@ -97,15 +97,43 @@ filterLabel.overlap Variant Overlap filterValues.overlap 10 to 25,25 to 50,50 to 75,75 to 90,90 to 100 filterLabel.type Variant Type filterValues.type alu deletion,copy number gain,copy number loss,copy number variation,deletion,duplication,herv deletion,line1 deletion,sva deletion filterLabel.length Variant Length filterValues.length Under 10KB,10KB to 100KB,100KB to 1MB,Over 1MB track dbVar_conflict_pathogenic parent dbVar_conflict on shortLabel dbVar Curated Conflict SVs longLabel NCBI dbVar Curated Common SVs: Conflicts with Pathogenic bigDataUrl /gbdb/$D/bbi/dbVar/conflict_pathogenic.bb type bigBed 9 + . url https://www.ncbi.nlm.nih.gov/dbvar/variants/$$ urlLabel NCBI Variant Page: + +searchTable dbVar_common_gnomad +searchMethod exact +searchType bigBed + +searchTable dbVar_common_1000g +searchMethod exact +searchType bigBed + +searchTable dbVar_common_decipher +searchMethod exact +searchType bigBed + +searchTable dbVar_common_european +searchMethod exact +searchType bigBed + +searchTable dbVar_common_african +searchMethod exact +searchType bigBed + +searchTable dbVar_common_global +searchMethod exact +searchType bigBed + +searchTable dbVar_conflict_pathogenic +searchMethod exact +searchType bigBed