d93d7b14a11b7c22b2275df5c8db88f9232efeb7 kate Thu Aug 27 11:00:26 2020 -0700 First cut COVID GWAS track. refs #26129 diff --git src/hg/makeDb/trackDb/human/covidGwas.html src/hg/makeDb/trackDb/human/covidGwas.html new file mode 100644 index 0000000..1004eff --- /dev/null +++ src/hg/makeDb/trackDb/human/covidGwas.html @@ -0,0 +1,31 @@ +<H2>Description</H2> +<p> +This track set shows GWAS meta-analyses from the +<a href='https://covidhg19.org'>COVID-19 Host Genetics Initiative</a>. + +Two studies are represented in this track: + +<ul> +<li>B2: hospitalized covid vs. population (3199 cases from 8 studies)</li> +<li>C2: covid vs. population (6696 cases from 18 studies)</li> +</ul> + +Data underlying these tracks was obtained from Release 3 (June 2020) results provided at +<a href='https://www.covid19hg.org/results/'>https://www.covid19.org/results</a>. + + +<H2>Display Conventions</H2> +<p> +Displayed items are colored by GWAS effect: red for positive, blue for negative. +The color saturation indicates statistical significance: greater than .05 pValue are brightly colored +(bright red +<span style='background-color: #ff0000;'> </span> +, bright blue +<span style='background-color: #0000ff;'> </span> +), +those with less significance are paler (light red +<span style='background-color: #ffa0a0;'> </span> +, light blue +<span style='background-color: #a0a0ff;'> </span> +). +</p>