4475cd6aa12bbf5ac823c29e01271e2f23b39d22 mspeir Tue Aug 25 13:13:22 2020 -0700 Adding a list of datasets to cell browser section on covid page, refs #25773 diff --git src/hg/htdocs/covid19.html src/hg/htdocs/covid19.html index b58fc7d..ae3d1e0 100755 --- src/hg/htdocs/covid19.html +++ src/hg/htdocs/covid19.html @@ -61,33 +61,48 @@ <div class="row"> <!-- Genome browser --> <div class="col-md-6"> <h2>UCSC Genome Browser view of SARS-CoV-2 genomic datasets</h2> <a href="../cgi-bin/hgTracks?db=wuhCor1" target="_blank"> <img src="../images/sarsCov2SpikeProteinsSession.png"></a> <br> Video tutorial: Using the <a href = http://bit.ly/ucscVid20 target = _blank>coronavirus browser</a>. </div> <!-- Cell browser --> <div class="col-md-6"> - <h2>UCSC Cell Browser view of lung gene expression datasets</h2> - <a href="https://cells.ucsc.edu/?bp=lung" target="_blank"> - <img src="../images/cellBrowserAce2EilsLung.png"></a> + <h2>COVID-19 and Lung gene expression data in the UCSC Cell Browser:</h2> + <p>COVID-19 Datasets: + <ul> + <li><a href="https://covid19-balf.cells.ucsc.edu" + target="_blank">Bronchoalveolar Immune Cells in COVID-19</a> + <li><a href="https://covid-airways.cells.ucsc.edu" + target="_blank">COVID-19 Airways</a> + <li><a href="https://covid19-influenza-response.cells.ucsc.edu" + target="_blank">COVID-19 and Influenza Immunophenotyping</a> + <li><a href="https://covid19atlas.cells.ucsc.edu" target="_blank">COVID-19 Cell Atlas</a> + <li><a href="https://scarface.cells.ucsc.edu" + target="_blank">COVID-19 SARS-CoV-2 and coronavirus-associated + receptors and factors (SCARFs)</a> + <li><a href="https://hca-lungmap-integrated.cells.ucsc.edu" + target="_blank">HCA-LungMAP COVID-19 Integrated Analysis</a> + </ul> + <p><a href="https://cells.ucsc.edu/?bp=lung" + target="blank">Other Lung datasets in the Cell Browser</a> </div> </div> <h2 id="news">News</h2> <ul> <li>May 29, 2020: Release of public track hub <a target="_blank" href="http://ftp.ebi.ac.uk/pub/databases/gencode/covid19_trackhub/COVID19_Hub.html"> GENCODE annotation of COVID-19 associated genes</a>. View in <a target="_blank" href="../cgi-bin/hgTracks?hubUrl=http://ftp.ebi.ac.uk/pub/databases/gencode/covid19_trackhub/hub.txt&genome=hg38&position=lastDbPos" > browser</a>. </li> <li><a target="_blank" href="goldenPath/newsarch.html#051220">Video: Coronavirus Browser SARS CoV-2</a></li>