ddcb89a9cfc669f8a951f944049780de47402df5
kate
  Tue Sep 15 15:26:31 2020 -0700
1. Add size as lolly variable.  2. Add filter for minimum effect size (abs value). refs #26129

diff --git src/hg/makeDb/trackDb/human/covidHgiGwas.ra src/hg/makeDb/trackDb/human/covidHgiGwas.ra
index 97efe46..204a727 100644
--- src/hg/makeDb/trackDb/human/covidHgiGwas.ra
+++ src/hg/makeDb/trackDb/human/covidHgiGwas.ra
@@ -1,35 +1,40 @@
 track covidHgiGwas
 shortLabel COVID-19 GWAS
 longLabel GWAS meta-analyses from the COVID-19 Host Genetics Initiative
 compositeTrack on
 group phenDis
 visibility hide
 autoScale on
 maxHeightPixels 48:90:128
 pennantIcon New red
 type bigLolly 9 +
-lollyField 19
+lollyField 21
+lollySizeField 20
+lollyMaxSize 8
 mouseOver $name $ref/$alt effect $effectSize pval $pValue studies $sourceCount
 maxItems 500000
 filter.sourceCount 1
 filterLabel.sourceCount Minimum number of studies
-filter.pValue 3
-filter.effectSize -10:10
+filter.pValueLog 3
+filter.effectSize -25:25
+filterLabel.effectSize Effect size range
 filterByRange.effectSize on
-filterLimits.effectSize -10:10
+filterLimits.effectSize -25:25
+filter._effectSizeAbs 0
+filterLabel._effectSizeAbs Minimum effect size +-
 noScoreFilter on
 bedNameLabel SNP
 chromosomes chr1,chr2,chr3,chr4,chr5,chr6,chr7,chr8,chr9,chr10,chr11,chr12,chr13,chr14,chr15,chr16,chr17,chr18,chr19,chr20,chr21,chr22
 
     track covidHgiGwasC2
     parent covidHgiGwas
     shortLabel COVID GWAS
     longLabel COVID GWAS from the COVID-19 Host Genetics Initiative (6696 cases, 18 studies)
     bigDataUrl /gbdb/$D/covidHgiGwas/covidHgiGwasC2.$D.bb
 
     track covidHgiGwasB2
     parent covidHgiGwas
     shortLabel Hosp COVID GWAS
     longLabel Hospitalized COVID GWAS from the COVID-19 Host Genetics Initiative (3199 cases, 8 studies)
     bigDataUrl /gbdb/$D/covidHgiGwas/covidHgiGwasB2.$D.bb