af6381df096fc3301bcd266e3724716c4d713227 abenetpa Wed Sep 23 03:23:50 2020 -0700 changed track short name refs #25424 diff --git src/hg/makeDb/trackDb/human/trackDb.dbVar.ra src/hg/makeDb/trackDb/human/trackDb.dbVar.ra index 0ee2237..a6b5bb3 100644 --- src/hg/makeDb/trackDb/human/trackDb.dbVar.ra +++ src/hg/makeDb/trackDb/human/trackDb.dbVar.ra @@ -1,132 +1,132 @@ track dbVarSv superTrack on group varRep html dbVarCurated -shortLabel NCBI Common Struct Var +shortLabel dbVar Common Struct Var longLabel NCBI Curated Common Structural Variants from dbVar track dbVar_common superTrack dbVarSv pack group varRep compositeTrack on visibility pack itemRgb on type bigBed 9 + . html dbVarCommon shortLabel dbVar Common SV longLabel NCBI dbVar Curated Common Structural Variants mouseOverField label searchIndex name filterLabel.type Variant Type filterValues.type alu deletion,copy number gain,copy number loss,copy number variation,deletion,duplication,herv deletion,line1 deletion,sva deletion filterLabel.length Variant Size filterValues.length Under 10KB,10KB to 100KB,100KB to 1MB,Over 1MB track dbVar_common_gnomad parent dbVar_common on shortLabel dbVar Curated gnomAD SVs longLabel NCBI dbVar Curated Common SVs: all populations from gnomAD bigDataUrl /gbdb/$D/bbi/dbVar/common_gnomad.bb type bigBed 9 + . url https://www.ncbi.nlm.nih.gov/dbvar/variants/$$ urlLabel NCBI Variant Page: track dbVar_common_1000g parent dbVar_common on shortLabel dbVar Curated 1000 Genomes SVs longLabel NCBI dbVar Curated Common SVs: all populations from 1000 Genomes bigDataUrl /gbdb/$D/bbi/dbVar/common_1000g.bb type bigBed 9 + . url https://www.ncbi.nlm.nih.gov/dbvar/variants/$$ urlLabel NCBI Variant Page: track dbVar_common_decipher parent dbVar_common on shortLabel dbVar Curated DECIPHER SVs longLabel NCBI dbVar Curated Common SVs: all populations from DECIPHER bigDataUrl /gbdb/$D/bbi/dbVar/common_decipher.bb type bigBed 9 + . url https://www.ncbi.nlm.nih.gov/dbvar/variants/$$ urlLabel NCBI Variant Page: track dbVar_common_african parent dbVar_common on shortLabel dbVar Curated African SVs longLabel NCBI dbVar Curated Common SVs: African bigDataUrl /gbdb/$D/bbi/dbVar/common_african.bb type bigBed 9 + . url https://www.ncbi.nlm.nih.gov/dbvar/variants/$$ urlLabel NCBI Variant Page: track dbVar_common_european parent dbVar_common on shortLabel dbVar Curated European SVs longLabel NCBI dbVar Curated Common SVs: European bigDataUrl /gbdb/$D/bbi/dbVar/common_european.bb type bigBed 9 + . url https://www.ncbi.nlm.nih.gov/dbvar/variants/$$ urlLabel NCBI Variant Page: track dbVar_common_global parent dbVar_common on shortLabel dbVar Curated All Populations longLabel NCBI dbVar Curated Common SVs: all populations bigDataUrl /gbdb/$D/bbi/dbVar/common_global.bb type bigBed 9 + . url https://www.ncbi.nlm.nih.gov/dbvar/variants/$$ urlLabel NCBI Variant Page: track dbVar_conflict superTrack dbVarSv pack compositeTrack on visibility pack itemRgb on type bigBed 9 + . html dbVarConflict shortLabel dbVar Conflict SV longLabel NCBI dbVar Curated Conflict Variants mouseOverField label searchIndex name filterLabel.overlap Variant Overlap filterValues.overlap 10 to 25,25 to 50,50 to 75,75 to 90,90 to 100 filterLabel.type Variant Type filterValues.type alu deletion,copy number gain,copy number loss,copy number variation,deletion,duplication,herv deletion,line1 deletion,sva deletion filterLabel.length Variant Length filterValues.length Under 10KB,10KB to 100KB,100KB to 1MB,Over 1MB track dbVar_conflict_pathogenic parent dbVar_conflict on shortLabel dbVar Curated Conflict SVs longLabel NCBI dbVar Curated Common SVs: Conflicts with Pathogenic bigDataUrl /gbdb/$D/bbi/dbVar/conflict_pathogenic.bb type bigBed 9 + . url https://www.ncbi.nlm.nih.gov/dbvar/variants/$$ urlLabel NCBI Variant Page: searchTable dbVar_common_gnomad searchMethod exact searchType bigBed searchTable dbVar_common_1000g searchMethod exact searchType bigBed searchTable dbVar_common_decipher searchMethod exact searchType bigBed searchTable dbVar_common_european searchMethod exact searchType bigBed searchTable dbVar_common_african searchMethod exact searchType bigBed searchTable dbVar_common_global searchMethod exact searchType bigBed searchTable dbVar_conflict_pathogenic searchMethod exact searchType bigBed