ee8c009611ab4aa8076b43754983e6b46cd85b9f kate Tue Sep 22 10:22:15 2020 -0700 Update COVID landing page to make Nature Genetics manuscript more visible. refs #25217 diff --git src/hg/htdocs/covid19.html src/hg/htdocs/covid19.html index 84700d5..e0a96c8 100755 --- src/hg/htdocs/covid19.html +++ src/hg/htdocs/covid19.html @@ -1,229 +1,234 @@

COVID-19 Pandemic Resources at UCSC - - Updated:   September 8, 2020

+ +Updated: September 22, 2020

The SARS-CoV-2 coronavirus emerged in December 2019 as a novel human pathogen causing a severe acute respiratory syndrome (COVID-19). In the following months, the disease spread internationally and was declared a pandemic by the World Health Organization on March 11, 2020.

We at the UC Santa Cruz Genomics Institute are responding to the urgency of supporting biomedical research aimed at developing therapeutics and a vaccine for this devastating illness by fast-tracking the UCSC Genome Browser for SARS-Cov-2 and incorporating relevant biomedical datasets such as single-cell lung gene expression into the UCSC Cell Browser. +

+

A manuscript describing this work, - -The UCSC SARS-CoV-2 Genome Browser, -is in press and currently available from the -bioRxiv preprint server. + +The UCSC SARS-CoV-2 Genome Browser, was published in the September 9 issue of Nature Genetics.

COVID-19 transmission as of May 30, 2020, from Nextstrain
COVID-19 transmission as of May 30, 2020
 Latest situation report from Nextstrain.org

UCSC Genome Browser view of SARS-CoV-2 genomic datasets


Video tutorial: Using the coronavirus browser.

COVID-19 and Lung gene expression data in the UCSC Cell Browser:

COVID-19 Datasets:

Other Lung datasets in the Cell Browser

News

Funding

The UCSC Genome Browser is a publicly available web resource serving the research community since July 2000. Both the Genome Browser and UCSC Cell Browser are funded by the NIH National Human Genome Research Institute. In addition to this funding, the COVID-19 projects here are funded by generous supporters including: several anonymous donors; Pat and Roland Rebele; Eric and Wendy Schmidt by recommendation of the Schmidt Futures program; the Center for Information Technology Research in the Interest of Society (CITRIS); and the University of California Office of the President (UCOP). To contribute, click here.