8a144988470f693d6618c13ba5fe364b56b428d2 dschmelt Fri Oct 9 14:36:38 2020 -0700 Correcting relative links for #25207 diff --git src/hg/makeDb/trackDb/human/decipher.html src/hg/makeDb/trackDb/human/decipher.html index 3b1c9c4..70927ee 100644 --- src/hg/makeDb/trackDb/human/decipher.html +++ src/hg/makeDb/trackDb/human/decipher.html @@ -60,31 +60,31 @@ Further information on each variant is displayed on the details page by a click onto any variant. </p> <P> For the <b>CNVs track</b>, the entries are colored by the <b>type of variant</b>: <ul> <li><b><font color="red">red</font></b> for loss</li> <li><b><font color="blue">blue</font></b> for gain</li> <li><b><font color="grey">grey</font></b> for amplification</li> </ul> </P> <P> A light-to-dark color gradient indicates the <b>clinical significance</b> of each variant, with the lightest shade being benign, to the darkest shade being pathogenic. Detailed information on the -CNV color code is described <a href="https://genome.ucsc.edu/goldenPath/help/hgCnvColoring.html">here</a>. +CNV color code is described <a href="../../goldenPath/help/hgCnvColoring.html">here</a>. Items can be filtered according to the size of the variant, variant type, and clinical significance using the track <b>Configure</b> options. </P> <P> For the <b>SNVs track</b>, the entries are colored according to the estimated <b>clinical significance</b> of the variant: <ul> <li><b><font color="black">black</font></b> for likely or definitely pathogenic</li> <li><b><font color="#888">dark grey</font></b> for uncertain or unknown</li> <li><b><font color="#c8c8c8">light grey</font></b> for likely or definitely benign</li> </ul> </P> <H2>Method</H2>