Commits for galt

v405_base to v406_preview (2020-10-05 to 2020-10-12) v406

7bb6da83f4a5c8be7932c48c22eb6c917e222ba1 Tue Oct 6 11:38:32 2020 -0700

• oops, another little hgBlat bug with Blats Guess and SearchAllGenomes and only newline for intput. refs #26285
  • src/hg/hgBlat/hgBlat.c - lines changed 3, context: html, text, full: html, text

7d0af5fc6dbc224c4131e6d6a43b09a8f661502b Thu Oct 8 23:09:56 2020 -0700

• Improving hgBlat by moving the gfServer connect from being done up front to being done in the per-thread routine. This means it should use fewer connections in worse case scenarios, and also mean that gfServer will not have to wait as long.
  • src/hg/hgBlat/hgBlat.c - lines changed 67, context: html, text, full: html, text

2aa9a5801154010a033d3cdc760a8c3e296e835a Fri Oct 9 02:30:57 2020 -0700

• Changed default -timeout to 90 seconds instead of 10. Improved handling skips further sending on socket after failure to avoid multiple long timeouts. refs #26285
  • src/blat/version.doc - lines changed 1, context: html, text, full: html, text
  • src/gfServer/gfServer.c - lines changed 53, context: html, text, full: html, text
  • src/inc/genoFind.h - lines changed 1, context: html, text, full: html, text