a9e45767d1ff8899bed32ff418e2ff20f29b4457 gperez2 Wed Oct 7 11:36:31 2020 -0700 Adding references to hgdowload2 refs #25778 diff --git src/hg/htdocs/FAQ/FAQdownloads.html src/hg/htdocs/FAQ/FAQdownloads.html index 60e9e1b..6f886dd 100755 --- src/hg/htdocs/FAQ/FAQdownloads.html +++ src/hg/htdocs/FAQ/FAQdownloads.html @@ -78,30 +78,34 @@ <p> For more information on using the UCSC DAS server, see <a href="#download23">Downloading data from the UCSC DAS server</a>.</p> <p> <p> Another option for querying sequence and annotation data is the <a href='../goldenPath/help/api.html' target=_blank>REST API</a>. This interface allows for extraction of sequence and annotations from both UCSC assemblies and from hubs.</p> <p> <strong>To quickly download large volumes of data you can use UDR (UDT Enabled Rysnc):</strong> UDR provides users much faster download rates. Here is an example using UDR, once installed, to download all the mouse mm9 ENCODE information that amounts to several terabytes:</p> <pre><code>$ udr rsync -avP hgdownload.soe.ucsc.edu::goldenPath/mm9/encodeDCC/ /my/local/mm9/</code></pre> <pre><code>$ udr rsync -avP hgdownload-euro.soe.ucsc.edu::goldenPath/mm9/encodeDCC/ /my/local/mm9/</code></pre> <p> + +Optional: download from our secondary download server. +<pre><code>$ udr rsync -avP hgdownload2.soe.ucsc.edu::goldenPath/mm9/encodeDCC/ /my/local/mm9/</code></pre> + Please read more about the new UDR method <a href="../../goldenPath/newsarch.html#030315" target="_blank">here</a>.</p> <a name="download35"></a> <h2>Metadata tables for GenBank and RefSeq moved to hgFixed database</h2> <h6>I can no longer find metadata tables like gbCdnaInfo for an assembly.</h6> <p> As of June 2016, the location of metadata tables that support the GenBank and RefSeq tracks (RefSeq, Other RefSeq, mRNA, EST, etc.) have been moved from directories of individual assemblies to one global database, hgFixed.</p> <p> The tables below (previously found per assembly) can now be downloaded from the <a href="http://hgdownload.soe.ucsc.edu/goldenPath/hgFixed/database/">hgFixed database</a>:</p> <!-- 3-column layout -->