08b3b394e57c1ca8a8b31ad773e2e7506c32b56b
hiram
  Wed Oct 7 15:06:28 2020 -0700
package in mm39 chainNet properly and a couple others refs #22271

diff --git src/hg/makeDb/trackDb/human/chainNetPrimate.ra src/hg/makeDb/trackDb/human/chainNetPrimate.ra
index 9910a6f..6159111 100644
--- src/hg/makeDb/trackDb/human/chainNetPrimate.ra
+++ src/hg/makeDb/trackDb/human/chainNetPrimate.ra
@@ -207,41 +207,46 @@
         subTrack primateChainNetViewchain off
         subGroups view=chain species=s019 clade=c01
         shortLabel $o_db Chain
         longLabel $o_Organism ($o_date) Chained Alignments
         type chain colAng1
         otherDb colAng1
 
         track chainMacFas5
         subTrack primateChainNetViewchain off
         subGroups view=chain species=s020 clade=c01
         shortLabel $o_Organism Chain
         longLabel $o_Organism ($o_date) Chained Alignments
         type chain macFas5
         otherDb macFas5
 
-#include chainNetRheMac8.ra
-#include chainNetRheMac10.ra
-
         track chainRheMac10
         subTrack primateChainNetViewchain off
-        subGroups view=chain species=s022 clade=c01
+        subGroups view=chain species=s021 clade=c01
         shortLabel $o_Organism Chain
         longLabel $o_Organism ($o_date) Chained Alignments
         type chain rheMac10
         otherDb rheMac10
 
+        track chainRheMac8
+        subTrack primateChainNetViewchain off
+        subGroups view=chain species=s022 clade=c01
+        shortLabel $o_Organism Chain
+        longLabel $o_Organism ($o_date) Chained Alignments
+        type chain rheMac8
+        otherDb rheMac8
+
         track chainRheMac2
         subTrack primateChainNetViewchain off
         subGroups view=chain species=s023 clade=c01
         shortLabel $o_db Chain
         longLabel $o_Organism ($o_date) Chained Alignments
         type chain rheMac2
         otherDb rheMac2
 
         track chainPapAnu4
         subTrack primateChainNetViewchain off
         subGroups view=chain species=s024 clade=c01
         shortLabel $o_db Chain
         longLabel $o_Organism ($o_date) Chained Alignments
         type chain papAnu4
         otherDb papAnu4
@@ -626,36 +631,44 @@
         shortLabel $o_db Net
         longLabel $o_Organism ($o_date) Alignment Net
         type netAlign colAng1 chainColAng1
         otherDb colAng1
 
         track netMacFas5
         subTrack primateChainNetViewnet off
         subGroups view=net species=s020 clade=c01
         shortLabel $o_Organism Net
         longLabel $o_Organism ($o_date) Alignment Net
         type netAlign macFas5 chainMacFas5
         otherDb macFas5
 
         track netRheMac10
         subTrack primateChainNetViewnet off
-        subGroups view=net species=s022 clade=c01
+        subGroups view=net species=s021 clade=c01
         shortLabel $o_Organism Net
         longLabel $o_Organism ($o_date) Alignment Net
         type netAlign rheMac10 chainRheMac10
         otherDb rheMac10
 
+        track netRheMac8
+        subTrack primateChainNetViewnet on
+        subGroups view=net species=s022 clade=c01
+        shortLabel $o_Organism Net
+        longLabel $o_Organism ($o_date) Alignment Net
+        type netAlign rheMac8 chainRheMac8
+        otherDb rheMac8
+
         track netRheMac2
         subTrack primateChainNetViewnet off
         subGroups view=net species=s023 clade=c01
         shortLabel $o_db Net
         longLabel $o_Organism ($o_date) Alignment Net
         type netAlign rheMac2 chainRheMac2
         otherDb rheMac2
 
         track netPapAnu4
         subTrack primateChainNetViewnet off
         subGroups view=net species=s024 clade=c01
         shortLabel $o_db Net
         longLabel $o_Organism ($o_date) Alignment Net
         type netAlign papAnu4 chainPapAnu4
         otherDb papAnu4