5f1a2569a3778e610356fc24fd8ead95a031c157
dschmelt
  Mon Nov 2 17:11:31 2020 -0800
dded the pennantIcon, hid the Mean proportion tracks, and drafted announcement HTML pages, and added to the gnomAD super track page refs #25869

diff --git src/hg/htdocs/goldenPath/newsarch.html src/hg/htdocs/goldenPath/newsarch.html
index d4a4c57..76d2821 100755
--- src/hg/htdocs/goldenPath/newsarch.html
+++ src/hg/htdocs/goldenPath/newsarch.html
@@ -39,30 +39,57 @@
     </div>
     <div class="col-sm-3">
       <ul>
         <li><a href="#2005">2005 News</a></li>
         <li><a href="#2004">2004 News</a></li>
         <li><a href="#2003">2003 News</a></li>
         <li><a href="#2002">2002 News</a></li>
         <li><a href="#2001">2001 News</a></li>
       </ul>
     </div>
   </div>
 </div>
 
 <!-- ============= 2020 archived news ============= -->
 <a name="2020"></a>
+
+<a name="110320"></a>
+<h2>Nov. 3, 2020 &nbsp;&nbsp; New gnomAD pext track for Tissue specific transcript expression</h2>
+<p>
+We are happy to share that we have updated our gnomAD super track to include
+the gnomAD pext datasets on the GRCh37/hg19 genome. This track displays isoform 
+expression levels across 53 tissues based on 11,706 tissue samples from 
+the Genotype Tissue Expression (GTEx) v7 dataset, showing a comprehensive 
+view of the expression of exons across 
+a gene using the proportion expression across transcripts, or pext metric, a 
+transcript-level annotation metric which quantifies isoform expression for variants.
+</p>
+<p>
+This may be especially useful to those interested in alternative splicing. For more
+information, please see the track description page and the associated publication:</p>
+<ul>
+<li><a href="/cgi-bin/hgTrackUi?db=hg19&g=gnomadPext">Gnomad pext track for hg19 </a></li>
+<li><a href="https://www.nature.com/articles/s41586-020-2329-2" target="_blank">Transcript 
+expression-aware annotation improves rare variant interpretation</a></li>
+</ul>
+<p>
+We would like to thank the gnomAD team at the BROAD institute and the UCSC Genome Browser team members
+Chris Lee, Anna Benet-Pages, and Daniel Schmelter for developing, and 
+releasing this track.
+</p>
+
+
 <a name="102320"></a>
 <h2>Oct. 23, 2020 &nbsp;&nbsp; The new GRCm39 Mouse Genome Browser is here</h2>
 <p>
 We are pleased to announce the release of a new mouse assembly, mm39, which corresponds to the
 GRCm39 assembly released by the <a href="https://www.ncbi.nlm.nih.gov/grc/mouse"
 target="_blank">Genome Reference Consortium</a> (GRC). Starting with this release, the UCSC Genome
 Browser version numbers for mouse assemblies will match those of the GRC to minimize version
 confusion. Hence, the GRCm39 assembly is referred to as mm39 in Genome Browser datasets and
 documentation.</p>
 <h3>About the assembly (mm39):</h3>
 <ul>
   <li>
     UCSC Genome Browser assembly ID: mm39</li>
   <li>
     Sequencing/Assembly provider ID: Genome Reference Consortium Mouse Build 39 (GCA_000001635.9)
@@ -396,30 +423,31 @@
 <a href="https://www.ncbi.nlm.nih.gov/dbvar/content/overview/" 
 target="_blank">dbVar, the database of Structural Variation from NCBI</a>.
 The Common Structural Variants track shows variants that meet the following criteria:
 more than 50 basepairs, occur in at least 100 samples, and have an allele frequency of 
 &gt;=0.01 in at least one population. For more information, please see the
 track description page:</p>
 <ul>
 <li><a href="/cgi-bin/hgTrackUi?db=hg38&g=dbVarSv">dbVar Structural Variants </a> (<a href="/cgi-bin/hgTrackUi?db=hg38&g=dbVarSv">hg38</a>/<a href="/cgi-bin/hgTrackUi?db=hg19&g=dbVarSv">hg19</a>)</li>
 </ul>
 <p>
 We thank the dbVar team at NCBI, especially John Lopez and Tim Hefferon for technical 
 coordination and consultation, and to Chris Lee, Anna Benet-Pages, and Daniel Schmelter 
 of the Genome Browser team for developing, and releasing this track.
 </p>
 <a name="100120"></a>
+
 <h2>Oct. 1, 2020 &nbsp;&nbsp; New video: Making links to the Genome Browser. 
 Part 3: Composite tracks, custom tracks and spreadsheets
 </h2>
 
 <p>
 We are happy to announce another release to the UCSC Genome Browser 
 <a href = "https://bit.ly/ucscVideos"
 target = _blank>YouTube channel</a>.
 </p>
 
 <p>
 This new video, <a href = 
 "https://bit.ly/ucscVid23" target = _blank>Making links to the UCSC Genome Browser.  
 Part 3: Composite tracks, custom tracks and spreadsheets</a> is the final installment 
 of a three-part series showing how to make links to the Browser.  This release features