1596652e312cb81a414ccbd0f393bfb0921d5f90
hiram
  Wed Dec 2 12:56:30 2020 -0800
trying a chainNet with dot names refs #26584

diff --git src/hg/makeDb/trackDb/trackDb.chainNet.asmHub.ra src/hg/makeDb/trackDb/trackDb.chainNet.asmHub.ra
index 1638bc7..78a8a08 100644
--- src/hg/makeDb/trackDb/trackDb.chainNet.asmHub.ra
+++ src/hg/makeDb/trackDb/trackDb.chainNet.asmHub.ra
@@ -1,55 +1,111 @@
 ################################################################
 # GCA_901343595v1_MONAX5 - woodchuck - Marmota monax - mammal
 ################################################################
 track chainNetGCA_901343595v1
 compositeTrack on
 shortLabel $o_Organism Chain/Net
 longLabel $o_Organism ($o_date), Chain and Net Alignments
 subGroup1 view Views chain=Chain net=Net
 dragAndDrop subTracks
 visibility hide
 group compGeno
 noInherit on
 priority 200.3
 color 0,0,0
 altColor 255,255,0
 type bed 3
 sortOrder view=+
 matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
 matrixHeader A, C, G, T
 otherDb GCA_901343595v1
 chainMinScore 3000
 chainLinearGap medium
 spectrum on
 html chainNet
 
     track chainNetGCA_901343595v1Viewchain
     shortLabel Chain
     view chain
     visibility pack
     parent chainNetGCA_901343595v1
     spectrum on
 
         track chainGCA_901343595v1_MONAX5
         parent chainNetGCA_901343595v1Viewchain
         subGroups view=chain
         shortLabel $o_Organism Chain
         longLabel $o_Organism ($o_date) Chained Alignments
         type chain GCA_901343595v1
         html chainNet
 
     track chainNetGCA_901343595v1Viewnet
     shortLabel Net
     view net
     visibility dense
     parent chainNetGCA_901343595v1
 
         track netGCA_901343595v1_MONAX5
         parent chainNetGCA_901343595v1Viewnet
         subGroups view=net
         shortLabel $o_Organism Net
         longLabel $o_Organism ($o_date) Alignment Net
         type netAlign GCA_901343595v1 chainGCA_901343595v1_MONAX5
         html chainNet
 
 ################################################################
+# GCF_009829145.1_bChiLan1.pri - lance-tailed manakin - Chiroxiphia lanceolata - birds
+################################################################
+track chainNetGCF_009829145.1
+compositeTrack on
+shortLabel $o_Organism Chain/Net
+longLabel $o_Organism ($o_date), Chain and Net Alignments
+subGroup1 view Views chain=Chain net=Net
+dragAndDrop subTracks
+visibility hide
+group compGeno
+noInherit on
+priority 200.3
+color 0,0,0
+altColor 255,255,0
+type bed 3
+sortOrder view=+
+matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
+matrixHeader A, C, G, T
+otherDb GCF_009829145.1
+chainMinScore 3000
+chainLinearGap medium
+spectrum on
+html chainNet
+
+    track chainNetGCF_009829145.1Viewchain
+    shortLabel Chain
+    view chain
+    visibility pack
+    parent chainNetGCF_009829145.1
+    spectrum on
+
+        track chainGCF_009829145.1_bChiLan1.pri
+        parent chainNetGCF_009829145.1Viewchain
+        subGroups view=chain
+        shortLabel $o_Organism Chain
+        longLabel $o_Organism ($o_date) Chained Alignments
+        type bigChain
+        bigDataUrl /gbdb/mm39/bbi/chainNet/chainGCF_009829145.1.bb
+        linkDataUrl /gbdb/mm39/bbi/chainNet/chainGCF_009829145.1Link.bb
+        html chainNet
+
+    track chainNetGCF_009829145.1Viewnet
+    shortLabel Net
+    view net
+    visibility dense
+    parent chainNetGCF_009829145.1
+
+        track netGCF_009829145.1_bChiLan1.pri
+        parent chainNetGCF_009829145.1Viewnet
+        subGroups view=net
+        shortLabel $o_Organism Net
+        longLabel $o_Organism ($o_date) Alignment Net
+        type netAlign GCF_009829145.1 chainGCF_009829145.1_bChiLan1.pri
+        html chainNet
+
+################################################################