d01fc76ae53ffedfb53bef76d85b6faebfd34995 jnavarr5 Mon Nov 16 15:33:06 2020 -0800 Capitalizing the 'Trios' view on the descripiton page. Adding the 'new' pennantIcon for the annoucnement. Shortening the shortLabel for the structural variants. Captializing 'in' to match the other tracks' longLabels. Removing an extra space in 'Chinese Trio'. refs #24349 and #25873 diff --git src/hg/makeDb/trackDb/human/trackDb.giab.ra src/hg/makeDb/trackDb/human/trackDb.giab.ra index 6175009..9685a51 100644 --- src/hg/makeDb/trackDb/human/trackDb.giab.ra +++ src/hg/makeDb/trackDb/human/trackDb.giab.ra @@ -1,68 +1,69 @@ track giab shortLabel Genome In a Bottle longLabel Genome In a Bottle Structural Variants and Trios compositeTrack on visibility hide -subGroup1 view Views trios=trios sv=Structural_Variants +subGroup1 view Views trios=Trios sv=Structural_Variants type bed 3 group varRep html giab +pennantIcon New red /goldenPath/newsarch.html#111620 "Released Nov. 16, 2020" track svView - shortLabel Genome In a Bottle Structural Variants - longLabel Genome in a Bottle Structural Variants (dbVar nstd175) + shortLabel Structural Variants + longLabel Genome In a Bottle Structural Variants (dbVar nstd175) view sv type bigBed 9 + parent giab visibility pack track giabSv parent svView - shortLabel Genome In a Bottle Structural Variants + shortLabel Structural Variants longLabel Genome in a Bottle Structural Variants (dbVar nstd175) type bigBed 9 + subGroups view=sv itemRgb on url https://www.ncbi.nlm.nih.gov/dbvar/variants/$$/#VariantDetails urlLabel dbVar Variant Details: urls dbVarUrl="$$" mouseOverField _mouseOver bigDataUrl /gbdb/$D/giab/structuralVariants/giabSv.bb track triosView shortLabel Genome In a Bottle Trios longLabel Genome in a Bottle Ashkenazim and Chinese Trios view trios type vcfPhasedTrio parent giab visibility hide track ashkenazimTrio parent triosView shortLabel Ashkenazim Trio longLabel Genome In a Bottle Ashkenazim Trio type vcfPhasedTrio subGroups view=trios bigDataUrl /gbdb/$D/giab/AshkenazimTrio/merged.vcf.gz maxWindowToDraw 5000000 vcfUseAltSampleNames on vcfDoFilter off vcfDoQual off vcfDoMaf off vcfChildSample HG002|son vcfParentSamples HG003|father,HG004|mother track chineseTrio parent triosView shortLabel Chinese Trio longLabel Genome In a Bottle Chinese Trio type vcfPhasedTrio subGroups view=trios bigDataUrl /gbdb/$D/giab/ChineseTrio/merged.vcf.gz maxWindowToDraw 5000000 vcfUseAltSampleNames on vcfDoFilter off vcfDoQual off vcfDoMaf off vcfChildSample HG005|son vcfParentSamples HG006|father,HG007|mother