Commits for chmalee

v408_preview to v408_preview2 (2020-11-23 to 2020-11-30) v408

e57a5ccb480ec2763fb049b88bec3f8012c70993 Tue Nov 24 08:35:08 2020 -0800

• gnomAD v3.1 ready for QA, refs #26449
  • src/hg/makeDb/doc/hg38/gnomad.txt - lines changed 63, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/gnomad.ra - lines changed 26, context: html, text, full: html, text

513ff234094b883276ecb289fd9839792e2ddb20 Tue Nov 3 16:39:53 2020 -0800

• First cut of custom table on hgc, no styling
  • src/hg/hgc/hgc.c - lines changed 78, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/trackDb.gnomad.ra - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/tagTypes.tab - lines changed 1, context: html, text, full: html, text

ce4471a047ac2ff82d0384c4b55607f8181bb151 Tue Nov 24 11:50:09 2020 -0800

• Add population freq table to gnomAD v3.1 update, refs #26449
  • src/hg/makeDb/trackDb/human/hg38/gnomad.ra - lines changed 1, context: html, text, full: html, text

e01ec3b3db24748aeb0797ca4807d9a2c427d71d Wed Nov 25 10:27:06 2020 -0800

• Make parseLrgXml.sh have an optional argument pointing to where the downloaded xml lives so we don't have to duplicate files for multiple assemblies, refs #17877
  • src/hg/utils/automation/parseLrgXml.pl - lines changed 8, context: html, text, full: html, text