041918f9fb9dfa0f7f0453bf6d6f512f84ef1a63
jnavarr5
  Mon Nov 30 09:28:16 2020 -0800
Updating redirected links for galGal3 found by the uiLinks cronjob, no Redmine.

diff --git src/hg/makeDb/trackDb/chicken/bgiSnp.html src/hg/makeDb/trackDb/chicken/bgiSnp.html
index 260b7fe..06efd78 100644
--- src/hg/makeDb/trackDb/chicken/bgiSnp.html
+++ src/hg/makeDb/trackDb/chicken/bgiSnp.html
@@ -1,49 +1,49 @@
 <H2>Description</H2>
 <P>
 This track shows the single nucleotide polymorphisms (SNPs) and/or
 insertions/deletions (indels) determined by the 
-<A HREF="http://www.genomics.cn/en/index" TARGET=_BLANK>
+<A HREF="https://en.genomics.cn/" TARGET=_BLANK>
 Beijing Genomics Institute</A> (BGI).  
 Genomic sequence reads from 3 alternate strains of chicken (Broiler,
 Layer and Silkie) were used to determine the SNPs relative to the
 reference assembly for Red Jungle Fowl (RJF).
 </P>
 <P>
 SNP names are of the format 
 snp.[<em>supercontig</em>].[<em>contig</em>].[<em>position</em>].[<em>type</em>].[<em>strain</em>]:
 </P>
 <UL>
 <LI><B><em>supercontig</em></B>: Supercontig number from assembly</LI>
 <LI><B><em>contig</em></B>: Contig number (within supercontig) from assembly</LI>
 <LI><B><em>position</em></B>: Starting offset within Contig.[<em>supercontig</em>].[<em>contig</em>]</LI>
 <LI><B><em>type</em></B>: S=Substitution, I=Insertion or D=Deletion</LI>
 <LI><B><em>strain</em></B>: 1=Broiler, 2=Layer, 3=Silkie</LI>
 </UL>
 
 <H2>Methods</H2>
 <P>
 Sequence reads from the Broiler, Layer and Silkie strains were mapped
 to the reference chicken assembly with blast. Then, cross_match was
 used for the detailed base-by-base comparison.  The Phred quality
 scores (-10 * log <SUB> 10</SUB> estimated error probability) are given for the 
 SNP base(s) in the assembly and the (single read) SNP read.  
 </P>
 
 <H2>Credits</H2>
 <P>Thanks to the 
-<A HREF="http://www.genomics.cn/en/index" TARGET=_BLANK>
+<A HREF="https://en.genomics.cn/" TARGET=_BLANK>
 Beijing Genomics Institute</A> for providing these data.
 </P>
 
 <H2>Terms of Use</H2>
 <OL>
 <LI>
 Users are free to use these data in scientific papers analyzing
 particular genes, if the Beijing Genomics Institute (BGI) is
 acknowledged.
 </LI>
 <LI>
 BGI and its collaborators reserve the right to publish the initial
 analyses of these data, including but not restricted to the large-scale
 identification of functional polymorphisms, evolutionary patterns and
 signs of selection, correlations with known QTLs, utility of data for