47f8a20771d50c3b3c24d525dee1df764be3fe1f kent Mon Jan 11 13:02:51 2021 -0800 Updating usage statement diff --git src/hca/hcaUnpack5/hcaUnpack5.c src/hca/hcaUnpack5/hcaUnpack5.c index d6d5b3f..ddd474f 100644 --- src/hca/hcaUnpack5/hcaUnpack5.c +++ src/hca/hcaUnpack5/hcaUnpack5.c @@ -5,31 +5,31 @@ #include "hash.h" #include "options.h" #include "localmem.h" #include "portable.h" #include "obscure.h" #include "sparseMatrix.h" #include <hdf5.h> void usage() /* Explain usage and exit. */ { errAbort( "hcaUnpack5 - Convert h5ad (scanpy) files to a directory filled with 3 things\n" "usage:\n" " hcaUnpack5 input.h5ad outDir\n" - "The output dir will be populated with exprMatrix.tsv, meta.tsv, and project.tsv\n" + "The output dir will be populated with exprMatrix.tsv, meta.tsv, and gene.lst\n" "where:\n" " exprMatrix.tsv has the cell x gene matrix with cells as columns. This includes\n" " the cell names in the first row and the gene names in the first column.\n." " meta.tsv has the cell-by-cell metadata. The first row is labels, and the first\n" " column corresponds with the cell names in exprMatrix\n" " gene.lst has the list of genes, one per line\n" "options:\n" " -noMatrix - skip the matrix making step\n" ); } /* Command line validation table. */ static struct optionSpec options[] = { {"noMatrix", OPTION_BOOLEAN}, {NULL, 0},