f67498a54f360b24b1e25b2787be0cd8c9067fc6 abenetpa Mon Dec 21 08:42:42 2020 -0800 corrected url link refs #26616 diff --git src/hg/makeDb/trackDb/human/covidHgiGwasR4Pval.html src/hg/makeDb/trackDb/human/covidHgiGwasR4Pval.html index 83bbb8a..6c8f8f4 100644 --- src/hg/makeDb/trackDb/human/covidHgiGwasR4Pval.html +++ src/hg/makeDb/trackDb/human/covidHgiGwasR4Pval.html @@ -23,31 +23,31 @@ seven genomic regions associated with severe COVID-19, on chromosomes 3, 6, 9, 12, 19, and 21; and one additional signal on chromosome 3 associated with COVID-19 partial-susceptibility. The four tracks here are based on data from HGI meta-analyses A2, B2, C1, and C2, described here: </p> <ul> <li><b>Severe COVID GWAS (A2):</b> Very severe respiratory confirmed covid vs. population (4336 cases from 12 studies)</li> <li><b>Hosp COVID GWAS (B2):</b> Hospitalized covid vs. population (7885 cases from 21 studies)</li> <li><b>Tested COVID GWAS (C1):</b> Covid vs. lab/self-reported negative (17965 cases from 33 studies)</li> <li><b>COVID GWAS (C2):</b> Covid vs. population (30937 cases from 36 studies)</li> </ul> Due to privacy concerns, these browser tracks exclude data provided by 23andMe contributed studies in the full analysis results. The actual study and case and control counts for the individual browser tracks are listed in the track labels. Details on -all studies can be found <a target="=blank" href="https://www.covid19hg.org/results/"><here></a>. +all studies can be found <a target="=blank" href="https://www.covid19hg.org/results/">here</a>. <H2>Display Conventions</H2> <p> Displayed items are colored by <b>GWAS effect</b>: red for positive (harmful) effect, blue for negative (protective) effect. The height ('lollipop stem') of the item is based on statistical significance (<b>p-value</b>). For better visualization of the data, only SNPs with p-values smaller than 1e-3 are displayed by default.</p> <p> The color saturation indicates effect size (beta coefficient): values over the median of effect size are brightly colored (bright red <span style='background-color: #ff0000;'> </span> , bright blue <span style='background-color: #0000ff;'> </span>