b8663b9ecba8668b58966601e972f8de2cad89d6 abenetpa Mon Dec 21 08:24:15 2020 -0800 improved desc page and track labels refs #26616 diff --git src/hg/makeDb/trackDb/human/covidHgiGwas.ra src/hg/makeDb/trackDb/human/covidHgiGwas.ra index ece877b..f6305f0 100644 --- src/hg/makeDb/trackDb/human/covidHgiGwas.ra +++ src/hg/makeDb/trackDb/human/covidHgiGwas.ra @@ -1,152 +1,152 @@ track covidHgiGwasR4Pval -html covidHgiGwasR4 +html covidHgiGwasR4Pval release alpha shortLabel COVID GWAS Pval longLabel GWAS meta-analyses (by Pvalue) Release 4 (Oct 2020) from COVID-19 Host Genetics Initiative compositeTrack on group covid visibility hide autoScale on maxHeightPixels 48:75:128 pennantIcon New red type bigLolly 9 + lollyField 13 mouseOver $name $ref/$alt effect $effectSize pval $pValue studies $sourceCount maxItems 500000 viewLimits 0:10 filter.sourceCount 1 filterLabel.sourceCount Minimum number of studies filter.pValueLog 3 filter.effectSize -1.6:2.2 filterLimits.effectSize -1.6:2.2 filterLabel.effectSize Effect size range filterByRange.effectSize on filter._effectSizeAbs 0 filterLabel._effectSizeAbs Minimum effect size +- noScoreFilter on bedNameLabel SNP chromosomes chr1,chr2,chr3,chr4,chr5,chr6,chr7,chr8,chr9,chr10,chr11,chr12,chr13,chr14,chr15,chr16,chr17,chr18,chr19,chr20,chr21,chr22 track covidHgiGwasR4PvalC2 release alpha parent covidHgiGwasR4Pval on shortLabel COVID GWAS R4 Pval longLabel COVID GWAS Pvalue Rel 4 (Oct 2020) from COVID-19 Host Genetics Initiative (Analysis C2: 17965 cases, 33 studies) bigDataUrl /gbdb/$D/covidHgiGwas/covidHgiGwasR4C2.$D.EC.bb track covidHgiGwasR4PvalB2 release alpha parent covidHgiGwasR4Pval on shortLabel Hosp COVID GWAS R4 Pval longLabel Hospitalized COVID GWAS Pvalue Rel 4 (Oct 2020) from COVID-19 Host Genetics Initiative (Analysis B2: 7885 cases, 21 studies) bigDataUrl /gbdb/$D/covidHgiGwas/covidHgiGwasR4B2.$D.EC.bb track covidHgiGwasR4PvalA2 release alpha parent covidHgiGwasR4Pval on shortLabel Severe COVID GWAS R4 Pval longLabel Very severe respiratory COVID GWAS Pvalue Rel 4 (Oct 2020) from COVID-19 Host Genetics Initiative (Analysis A2: 4336 cases, 12 studies) bigDataUrl /gbdb/$D/covidHgiGwas/covidHgiGwasR4A2.$D.EC.bb track covidHgiGwasR4PvalC1 release alpha parent covidHgiGwasR4Pval on shortLabel Tested COVID GWAS R4 Pval - longLabel Tested GWAS Pvalue (Analysis C1) Rel 4 (Oct 2020) from COVID-19 Host Genetics Initiative (11085 cases: 20 studies) + longLabel Tested GWAS Pvalue Rel 4 (Oct 2020) from COVID-19 Host Genetics Initiative (Analysis C1: 11085 cases: 20 studies) bigDataUrl /gbdb/$D/covidHgiGwas/covidHgiGwasR4C1.$D.EC.bb track covidHgiGwasR4 release alpha shortLabel COVID GWAS R4 longLabel GWAS meta-analyses (by effect size) Release 4 (Oct 2020) from the COVID-19 Host Genetics Initiative compositeTrack on group covid visibility hide autoScale on maxHeightPixels 48:75:128 pennantIcon New red type bigLolly 9 + lollyField 21 mouseOver $name $ref/$alt effect $effectSize pval $pValue studies $sourceCount maxItems 500000 filter.sourceCount 1 filterLabel.sourceCount Minimum number of studies filter.pValueLog 3 viewLimits 0:2.2 filter.effectSize -1.6:2.2 filterLimits.effectSize -1.6:2.2 filterLabel.effectSize Effect size range filterByRange.effectSize on filter._effectSizeAbs 0 filterLabel._effectSizeAbs Minimum effect size +- noScoreFilter on bedNameLabel SNP chromosomes chr1,chr2,chr3,chr4,chr5,chr6,chr7,chr8,chr9,chr10,chr11,chr12,chr13,chr14,chr15,chr16,chr17,chr18,chr19,chr20,chr21,chr22 track covidHgiGwasR4C2 release alpha parent covidHgiGwasR4 on shortLabel COVID GWAS R4 longLabel COVID GWAS Rel 4 (Oct 2020) from COVID-19 Host Genetics Initiative (Analysis C2: 17965 cases, 33 studies) bigDataUrl /gbdb/$D/covidHgiGwas/covidHgiGwasR4C2.$D.bb track covidHgiGwasR4B2 release alpha parent covidHgiGwasR4 on shortLabel Hosp COVID GWAS R4 longLabel Hospitalized COVID GWAS Rel 4 (Oct 2020) from COVID-19 Host Genetics Initiative (Analysis B2: 7885 cases, 21 studies) bigDataUrl /gbdb/$D/covidHgiGwas/covidHgiGwasR4B2.$D.bb track covidHgiGwasR4A2 release alpha parent covidHgiGwasR4 on shortLabel Severe COVID GWAS R4 longLabel Very severe respiratory COVID GWAS Release 4 (Oct 2020) from COVID-19 Host Genetics Initiative (Analysis A2: 4336 cases, 12 studies) bigDataUrl /gbdb/$D/covidHgiGwas/covidHgiGwasR4A2.$D.bb track covidHgiGwasR4C1 release alpha parent covidHgiGwasR4 on shortLabel Tested COVID GWAS R4 longLabel Tested GWAS Rel 4 (Oct 2020) from COVID-19 Host Genetics Initiative (Analysis C1: 11085 cases, 20 studies) bigDataUrl /gbdb/$D/covidHgiGwas/covidHgiGwasR4C1.$D.bb track covidHgiGwas shortLabel COVID-19 GWAS longLabel GWAS meta-analyses from the COVID-19 Host Genetics Initiative compositeTrack on group covid visibility hide autoScale on maxHeightPixels 48:75:128 type bigLolly 9 + lollyField 21 mouseOver $name $ref/$alt effect $effectSize pval $pValue studies $sourceCount maxItems 500000 filter.sourceCount 1 filterLabel.sourceCount Minimum number of studies filter.pValueLog 3 viewLimits -13:21 filter.effectSize -13:21 filterLimits.effectSize -13:21 filterLabel.effectSize Effect size range filterByRange.effectSize on filter._effectSizeAbs 0 filterLabel._effectSizeAbs Minimum effect size +- noScoreFilter on bedNameLabel SNP chromosomes chr1,chr2,chr3,chr4,chr5,chr6,chr7,chr8,chr9,chr10,chr11,chr12,chr13,chr14,chr15,chr16,chr17,chr18,chr19,chr20,chr21,chr22 track covidHgiGwasC2 parent covidHgiGwas on shortLabel COVID GWAS longLabel COVID GWAS from the COVID-19 Host Genetics Initiative (6696 cases, 18 studies) bigDataUrl /gbdb/$D/covidHgiGwas/covidHgiGwasC2.$D.bb track covidHgiGwasB2 parent covidHgiGwas off shortLabel Hosp COVID GWAS longLabel Hospitalized COVID GWAS from the COVID-19 Host Genetics Initiative (3199 cases, 8 studies) bigDataUrl /gbdb/$D/covidHgiGwas/covidHgiGwasB2.$D.bb