9fe471a051c4ef427d5ff9175ea0fa8504aa1f50 gperez2 Wed Dec 9 16:09:36 2020 -0800 New entries for neoSch1, refs #19883 diff --git src/hg/htdocs/goldenPath/credits.html src/hg/htdocs/goldenPath/credits.html index 5231304..4541563 100755 --- src/hg/htdocs/goldenPath/credits.html +++ src/hg/htdocs/goldenPath/credits.html @@ -33,30 +33,31 @@ <li><a href="#bushbaby_credits">Bushbaby</a></li> <li><a href="#cat_credits">Cat</a></li> <li><a href="#chimp_credits">Chimpanzee</a></li> <li><a href="#chinese_hamster_credits">Chinese hamster</a></li> <li><a href="#chinese_pangolin_credits">Chinese pangolin</a></li> <li><a href="#cow_credits">Cow</a></li> <li><a href="#dog_credits">Dog</a></li> <li><a href="#dolphin_credits">Dolphin</a></li> <li><a href="#elephant_credits">Elephant</a></li> <li><a href="#ferret_credits">Ferret</a></li> <li><a href="#gibbon_credits">Gibbon</a></li> <li><a href="#golden_snub-nosed_monkey_credits">Golden snub-nosed monkey</a></li> <li><a href="#gorilla_credits">Gorilla</a></li> <li><a href="#green_monkey_credits">Green monkey</a></li> <li><a href="#guinea_pig_credits">Guinea pig</a></li> + <li><a href="#hawaiian_monk_seal_credits">Hawaiian monk seal</a></li> <li><a href="#hedgehog_credits">Hedgehog</a></li> <li><a href="#horse_credits">Horse</a></li> <li><a href="#kangaroo_rat_credits">Kangaroo rat</a></li> <li><a href="#malayan_flying_lemur_credits">Malayan flying lemur</a></li> <li><a href="#manatee_credits">Manatee</a></li> <li><a href="#marmoset_credits">Marmoset</a></li> <li><a href="#megabat_credits">Megabat</a></li> <li><a href="#microbat_credits">Microbat</a></li> <li><a href="#minke_whale_credits">Minke whale</a></li> <li><a href="#mouse_credits">Mouse</a></li> <li><a href="#mouse_lemur_credits">Mouse lemur</a></li> <li><a href="#naked_mole-rat_credits">Naked mole-rat</a></li> <li><a href="#opossum_credits">Opossum</a></li> <li><a href="#orangutan_credits">Orangutan</a></li> <li><a href="#panda_credits">Panda</a></li> @@ -1668,30 +1669,55 @@ <ul> <li> The data may be freely downloaded, used in analyses, and repackaged in databases. </li> <li> Users are free to use the data in scientific papers analyzing particular genes and regions if the provider of these data is properly acknowledged. </li> <li> The center producing the data reserves the right to publish the initial large-scale analyses of the data set, including large-scale identification of regions of evolutionary conservation and large-scale genomic assembly. Large-scale refers to regions with size on the order of a chromosome (that is, 30 Mb or more). </li> <li> Any redistribution of the data should carry this notice. </li> </ul> +<!-- Hawaiian monk seal Credits --> +<a name="hawaiian_monk_seal_credits"></a> +<h2>Hawaiian monk seal genome</h2> +<p> +<strong>Sequencing/Assembly: </strong> +<a href="https://www.jhu.edu/" +target="_blank">Johns Hopkins University</a>, Baltimore, MA, USA </p> +<p> +<strong>UCSC Hawaiian monk seal Genome Browser/Annotations:</strong> </p> +<ul> + <li> + <a href="../../cgi-bin/hgGateway?db=neoSch1" target="_blank">neoSch1</a>: Hiram Clawson, Robert Kuhn, and Gerardo Perez</li> +</ul> +<a name="hawaiian_monk_seal_use"></a> +<h3>Data use</h3> +<p> +The Hawaiian monk seal sequence data may be freely downloaded, used in analyses, and repackaged in databases if +the provider is properly acknowledged: Alan F. Scott at Johns Hopkins University.</p> + +<p> +Mohr DW, Naguib A, Weisenfeld NI, Kumar V, Shah P, Church DM, Jaffe D, Scott AF. + <a href="https://doi.org/10.1101/128348" +target="_blank">Improved de Novo Genome Assembly: Linked-Read Sequencing Combined with Optical Mapping Produce a +High Quality Mammalian Genome at Relatively Low Cost</a>. <em>BioRxiv</em>. 2017 April 18 (preprint).</p> + <!-- Hedgehog Credits --> <a name="hedgehog_credits"></a> <h2>Hedgehog genome</h2> <p> <strong>Sequencing/Assembly: </strong> <a href="http://www.broadinstitute.org/scientific-community/science/projects/mammals-models/29-mammals-project" target="_blank">The Broad Institute</a> at MIT and Harvard, Cambridge, MA, USA </p> <p> <strong>DNA Samples: </strong> Dr. Neil J. Gemmell - <a href="http://www.otago.ac.nz/anatomy/research/r-g-d/index.html" target="_blank">Reproduction, Genomics and Development Group, University of Otago</a>, Dunedin, New Zealand </p> <p> <strong>UCSC Hedgehog Genome Browser/Annotations:</strong> </p> <ul> <li>