e101dc0e743a44ea8c8813ffcc29e8cc51697f40 chmalee Fri Jan 8 13:05:26 2021 -0800 LRG track otto updating for hg19 and hg38, refs #17877 #24672 diff --git src/hg/utils/otto/lrg/checkLrg.sh src/hg/utils/otto/lrg/checkLrg.sh new file mode 100755 index 0000000..7e6d670 --- /dev/null +++ src/hg/utils/otto/lrg/checkLrg.sh @@ -0,0 +1,11 @@ +#!/bin/bash +set -beEu -o pipefail +today=`date +%F` + +WORKDIR=$1 +mkdir -p ${WORKDIR}/${today} +cd ${WORKDIR}/${today} + +wget --quiet ftp://ftp.ebi.ac.uk/pub/databases/lrgex/LRG_public_xml_files.zip +unzip -qq LRG_public_xml_files.zip +../buildLrg.sh ${WORKDIR}