f0f0e9189da0e57ce9d327d9ac8720ae01570bdc braney Fri Jan 29 14:48:21 2021 -0800 ignore errors from find when making beta or public diff --git src/hg/makeDb/trackDb/makefile src/hg/makeDb/trackDb/makefile index d68c725..21bd2b3 100644 --- src/hg/makeDb/trackDb/makefile +++ src/hg/makeDb/trackDb/makefile @@ -242,48 +242,48 @@ HGDB_TRACKDB=trackDb ${BUILD_TRIX} trackDb metaDb cv/alpha/cv.ra ${ALPHA_MACHINE} ${HIVE_TRIX} $* ./makeTrixLinks trackDb ${HIVE_TRIX} $* # now build the relatedTracks table for each db ./buildRelatedTracks relatedTrack $* onbeta: /cluster/home/${USER}/.hg.conf.beta beta: onbeta clean ${GIT} pull ${MAKE} beta_all beta_all: ${DBS:%=%_beta} %_beta: # now do loads on hgwbeta - ssh ${BETA_MACHINE} find /gbdb/$* -type f -size +1c > $*.gbdbList.txt + -ssh ${BETA_MACHINE} find /gbdb/$* -type f -size +1c > $*.gbdbList.txt HGDB_CONF=/cluster/home/${USER}/.hg.conf.beta ./loadTracks ${EXTRA} -strict -gbdbList=$*.gbdbList.txt -release=beta trackDb hgFindSpec $* - rm $*.gbdbList.txt + rm -f $*.gbdbList.txt HGDB_CONF=/cluster/home/${USER}/.hg.conf.beta ./checkMetaDb beta metaDb $* HGDB_CONF=/cluster/home/${USER}/.hg.conf.beta HGDB_TRACKDB=trackDb ${BUILD_TRIX} trackDb metaDb cv/beta/cv.ra ${BETA_MACHINE} ${DATA_TRIX} $* # now make files for hgwdev-beta (we share the tables with hgwbeta) HGDB_CONF=/cluster/home/${USER}/.hg.conf.beta HGDB_TRACKDB=trackDb ${BUILD_TRIX} trackDb metaDb cv/beta/cv.ra ${ALPHA_MACHINE} ${HIVE_TRIX} $* public: onbeta clean ${GIT} pull ${MAKE} public_all public_all: ${DBS:%=%_public} %_public: - ssh ${PUBLIC_MACHINE} find /gbdb/$* -type f -size +1c > $*.gbdbList.txt + -ssh ${PUBLIC_MACHINE} find /gbdb/$* -type f -size +1c > $*.gbdbList.txt HGDB_CONF=/cluster/home/${USER}/.hg.conf.beta ./loadTracks ${EXTRA} -strict -gbdbList=$*.gbdbList.txt -release=public trackDb_public hgFindSpec_public $* - rm $*.gbdbList.txt + rm -f $*.gbdbList.txt HGDB_CONF=/cluster/home/${USER}/.hg.conf.beta ./checkMetaDb public metaDb_public $* HGDB_CONF=/cluster/home/${USER}/.hg.conf.beta HGDB_TRACKDB=trackDb_public ${BUILD_TRIX} trackDb_public metaDb_public cv/public/cv.ra ${BETA_MACHINE} ${DATA_TRIX} $* # this will fail if we are not in a beta checkout: checkbeta: ${GIT} branch | egrep '^[*] v[0-9]+_branch' > /dev/null # not sure if anyone actually uses the target below. It used to be "beta". buildBeta: checkbeta clean strict encodeReport: ${GIT} pull ./loadTracks ${EXTRA} trackDb_encodeReport hgFindSpec ${DBS} listDbs: