c8aa03601d740d2dd2d44d373d6513e0712344f5
lrnassar
  Mon Jan 25 13:58:52 2021 -0800
Adding new assembly canFam5 to newsArch page #25917

diff --git src/hg/htdocs/goldenPath/newsarch.html src/hg/htdocs/goldenPath/newsarch.html
index 4926041..6a09479 100755
--- src/hg/htdocs/goldenPath/newsarch.html
+++ src/hg/htdocs/goldenPath/newsarch.html
@@ -40,30 +40,69 @@
     <div class="col-sm-3">
       <ul>
         <li><a href="#2005">2005 News</a></li>
         <li><a href="#2004">2004 News</a></li>
         <li><a href="#2003">2003 News</a></li>
         <li><a href="#2002">2002 News</a></li>
         <li><a href="#2001">2001 News</a></li>
       </ul>
     </div>
   </div> 
 </div>
 
 <!-- ============= 2021 archived news ============= -->
 <a name="2021"></a>
 
+<a name="012621"></a>
+<h2>Jan. 26, 2021 &nbsp;&nbsp; New Genome Browser: Dog, canFam5 (<em>Canis lupus familiaris</em>)</h2>
+<p>
+A genome browser is now available for the <em>Canis lupus familiaris</em> assembly released in May 2019 by the
+<a href="https://umich.edu/" target="_blank"> University of Michigan</a> (UMICH_Zoey_3.1).
+<h3>About the assembly:</h3>
+<ul>
+  <li><b>UCSC Genome Browser assembly ID:</b>  <a href="../../cgi-bin/hgGateway?db=canFam5" 
+  target="_blank">canFam5</a></li>
+  <li><b>Sequencing/Assembly provider ID:</b> <a href="https://umich.edu/">
+University of Michigan</a></li>
+  <li><b>Assembly date:</b> May 2019</li>
+  <li><B>Accession ID:</B> GCA_005444595.1</li>
+  <li><B>NCBI Genome ID:</B> <A HREF='https://www.ncbi.nlm.nih.gov/genome/85'
+TARGET='_blank'>85</A> (<em>Canis lupus familiaris</em>)</li>
+  <li><B>NCBI Assembly ID:</B> <A HREF='https://www.ncbi.nlm.nih.gov/assembly/3218611'
+TARGET='_blank'>3218611</A></li>
+  <li><B>NCBI BioProject ID:</B> <A HREF='https://www.ncbi.nlm.nih.gov/bioproject/318403'
+TARGET='_blank'>318403</A></li>
+  <li><B>NCBI BioSample ID:</B> <A HREF='https://www.ncbi.nlm.nih.gov/biosample/SAMN04851098'
+TARGET='_blank'>SAMN04851098</A></li>
+  <li><b>Scaffold count: </b>794</li>
+  <li><b>Total size: </b>2,343,218,756</li>
+  <li><a href="../goldenPath/credits.html#dog_credits" 
+target="_blank" >Acknowledgments</a></li>
+</ul>
+<h3>Data and Downloads:</h3>
+<ul>
+  <li><a href="../goldenPath/credits.html#dog_use" 
+target="_blank" >Data use conditions and restrictions</a></li>
+  <li><a href="../goldenPath/help/ftp.html" 
+target="_blank" >Rsync</a> and
+<a href="ftp://hgdownload.soe.ucsc.edu/goldenPath/canFam5/" 
+target="_blank" >FTP</a></li>
+  <li><a href="http://hgdownload.soe.ucsc.edu/downloads.html#dog"
+target="_blank" >Downloads page</a></li>
+</ul>
+</p>
+
 <a name="012221"></a>
 <h2>Jan. 22, 2021 &nbsp;&nbsp; Updates to gnomAD variation track (GRCh37/hg19)(GRCh38/hg38)</h2>
 <p>
 We are pleased to announce updates to the
 <a href="../../cgi-bin/hgTrackUi?db=hg38&c=chr22&g=gnomadVariants"
 target="_blank">gnomAD Variants super-track</a> for the <a target="_blank"
 href="../../cgi-bin/hgTrackUi?db=hg19&c=chrX&g=gnomadSuper">hg19/GRCh37</a>
 and <a target="_blank"
 href="../../cgi-bin/hgTrackUi?db=hg38&c=chrX&g=gnomadVariants">hg38/GRCh38</a>
 human assemblies.</p>
 <ul>
   <li>gnomAD v3.1 is now available and contains variants from 76,156 whole genomes (and no exomes),
       all mapped to the GRCh38/hg38 reference sequence. 4,454 genomes were added to the number of
       genomes in the previous v3 release. For more detailed information on gnomAD v3.1, see the related
       <a href="https://gnomad.broadinstitute.org/blog/2020-10-gnomad-v3-1/"target="_blank">blog post</a>.</li>