627074545317c835b7de2119653fd86d0ce8bbea
dschmelt
  Fri Feb 26 16:40:53 2021 -0800
Adding a link to hgLiftOver refs #27086

diff --git src/hg/hgLiftOver/hgLiftOver.c src/hg/hgLiftOver/hgLiftOver.c
index 5252283..87d1f34 100644
--- src/hg/hgLiftOver/hgLiftOver.c
+++ src/hg/hgLiftOver/hgLiftOver.c
@@ -62,36 +62,37 @@
 char chainS[64];
 safef(chainS, sizeof(chainS), "%s.%s", chain->fromDb, chain->toDb);
 return cloneString(chainS);
 }
 
 void webMain(struct liftOverChain *chain, boolean multiple, boolean keepSettings, int minSizeQ, 
 	     int minChainT, float minBlocks, float minMatch, boolean fudgeThick)
 /* set up page for entering data */
 {
 struct dbDb *dbList;
 char *fromOrg = hOrganism(chain->fromDb), *toOrg = hOrganism(chain->toDb);
 char *chainString = chainStringVal(chain);
 cgiParagraph(
     "This tool converts genome coordinates and genome annotation files "
     "between assemblies.  "
-    "The input data can be pasted into the text box, or uploaded from a file.  "
-    "If a pair of assemblies cannot be selected from the pull-down menus,"
-    " a direct lift between them is unavailable.  "
-    "However, a sequential lift may be possible.  "
-    "Example: lift from Mouse, May 2004, to Mouse, Feb. 2006, and then from Mouse, "
-    "Feb. 2006 to Mouse, July 2007 to achieve a lift from mm5 to mm9.  "
+    "The input data can be pasted into the text box or uploaded from a file.  "
+    "For more information, please see our "
+    "<a href=\"../goldenPath/help/hgTracksHelp.html#Liftover\">LiftOver documentation</a>."
+    "&nbsp;&nbsp;If a pair of assemblies cannot be selected from the pull-down menus,"
+    " a sequential lift may still be possible.&nbsp;&nbsp;"
+    "For example, to lift from mm9 to mm39, lift from Mouse mm9 to mm10 and then from"
+    " mm10 to mm39.&nbsp;&nbsp;"
     "");
 
 /* create HMTL form */
 puts("<FORM ACTION=\"../cgi-bin/hgLiftOver\" METHOD=\"POST\" "
        " ENCTYPE=\"multipart/form-data\" NAME=\"mainForm\">\n");
 cartSaveSession(cart);
 
 /* create HTML table for layout purposes */
 puts("\n<TABLE WIDTH=\"100%\">\n");
 
 /* top two rows -- genome and assembly menus */
 cgiSimpleTableRowStart();
 cgiTableField("Original Genome: ");
 cgiTableField("Original Assembly: ");
 cgiTableField("New Genome: ");