71aa7746f5a5eeebf1262297a938c298467e74e1
hiram
  Mon Feb 15 12:14:55 2021 -0800
adding rn7 and moving all rats to euarchontoglires refs #26682

diff --git src/hg/makeDb/trackDb/trackDb.chainNet.ra src/hg/makeDb/trackDb/trackDb.chainNet.ra
index 99ec464..5d34be0 100644
--- src/hg/makeDb/trackDb/trackDb.chainNet.ra
+++ src/hg/makeDb/trackDb/trackDb.chainNet.ra
@@ -2845,234 +2845,30 @@
 
     track chainNetRegenRn0Viewnet
     shortLabel Net
     view net
     visibility full
     parent chainNetRegenRn0
 
         track netRegenRn0
         parent chainNetRegenRn0Viewnet
         subGroups view=net
         shortLabel $o_Organism Net
         longLabel $o_Organism ($o_date) Alignment Net
         type netAlign regenRn0 chainRegenRn0
         html chainNet
 
-track chainNetRn6
-compositeTrack on
-shortLabel $o_Organism Chain/Net
-longLabel $o_Organism ($o_date), Chain and Net Alignments
-subGroup1 view Views chain=Chain net=Net
-dragAndDrop subTracks
-visibility hide
-group compGeno
-noInherit on
-priority 209
-color 0,0,0
-altColor 100,50,0
-type bed 3
-sortOrder view=+
-matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
-matrixHeader A, C, G, T
-otherDb rn6
-chainMinScore 3000
-chainLinearGap medium
-spectrum on
-html chainNet
-
-    track chainNetRn6Viewchain
-    shortLabel Chain
-    view chain
-    visibility pack
-    parent chainNetRn6
-    spectrum on
-
-        track chainRn6
-        parent chainNetRn6Viewchain
-        subGroups view=chain
-        shortLabel $o_Organism Chain
-        longLabel $o_Organism ($o_date) Chained Alignments
-        type chain rn6
-        html chainNet
-
-    track chainNetRn6Viewnet
-    shortLabel Net
-    view net
-    visibility full
-    parent chainNetRn6
-
-        track netRn6
-        parent chainNetRn6Viewnet
-        subGroups view=net
-        shortLabel $o_Organism Net
-        longLabel $o_Organism ($o_date) Alignment Net
-        type netAlign rn6 chainRn6
-        html chainNet
-
-track chainNetRn5
-compositeTrack on
-shortLabel $o_Organism Chain/Net
-longLabel $o_Organism ($o_date), Chain and Net Alignments
-subGroup1 view Views chain=Chain net=Net
-dragAndDrop subTracks
-visibility hide
-group compGeno
-noInherit on
-priority 209
-color 0,0,0
-altColor 100,50,0
-type bed 3
-sortOrder view=+
-matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
-matrixHeader A, C, G, T
-otherDb rn5
-chainMinScore 3000
-chainLinearGap medium
-spectrum on
-html chainNet
-
-    track chainNetRn5Viewchain
-    shortLabel Chain
-    view chain
-    visibility pack
-    parent chainNetRn5
-    spectrum on
-
-        track chainRn5
-        parent chainNetRn5Viewchain
-        subGroups view=chain
-        shortLabel $o_Organism Chain
-        longLabel $o_Organism ($o_date) Chained Alignments
-        type chain rn5
-        html chainNet
-
-    track chainNetRn5Viewnet
-    shortLabel Net
-    view net
-    visibility full
-    parent chainNetRn5
-
-        track netRn5
-        parent chainNetRn5Viewnet
-        subGroups view=net
-        shortLabel $o_Organism Net
-        longLabel $o_Organism ($o_date) Alignment Net
-        type netAlign rn5 chainRn5
-        html chainNet
-
-track chainNetRn4
-compositeTrack on
-shortLabel $o_Organism Chain/Net
-longLabel $o_Organism ($o_date), Chain and Net Alignments
-subGroup1 view Views chain=Chain net=Net
-dragAndDrop subTracks
-visibility hide
-group compGeno
-noInherit on
-priority 209
-color 0,0,0
-altColor 100,50,0
-type bed 3
-sortOrder view=+
-matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
-matrixHeader A, C, G, T
-otherDb rn4
-chainMinScore 3000
-chainLinearGap medium
-spectrum on
-html chainNet
-
-    track chainNetRn4Viewchain
-    shortLabel Chain
-    view chain
-    visibility pack
-    parent chainNetRn4
-    spectrum on
-
-        track chainRn4
-        parent chainNetRn4Viewchain
-        subGroups view=chain
-        shortLabel $o_Organism Chain
-        longLabel $o_Organism ($o_date) Chained Alignments
-        type chain rn4
-        html chainNet
-
-    track chainNetRn4Viewnet
-    shortLabel Net
-    view net
-    visibility full
-    parent chainNetRn4
-
-        track netRn4
-        parent chainNetRn4Viewnet
-        subGroups view=net
-        shortLabel $o_Organism Net
-        longLabel $o_Organism ($o_date) Alignment Net
-        type netAlign rn4 chainRn4
-        html chainNet
-
-track chainNetRn3
-compositeTrack on
-shortLabel $o_db Chain/Net
-longLabel $o_Organism ($o_date), Chain and Net Alignments
-subGroup1 view Views chain=Chain net=Net
-dragAndDrop subTracks
-visibility hide
-group compGeno
-noInherit on
-priority 209
-color 0,0,0
-altColor 100,50,0
-type bed 3
-sortOrder view=+
-matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
-matrixHeader A, C, G, T
-otherDb rn3
-chainMinScore 3000
-chainLinearGap medium
-spectrum on
-html chainNet
-
-    track chainNetRn3Viewchain
-    shortLabel Chain
-    view chain
-    visibility pack
-    parent chainNetRn3
-    spectrum on
-
-        track chainRn3
-        parent chainNetRn3Viewchain
-        subGroups view=chain
-        shortLabel $o_Organism Chain
-        longLabel $o_Organism ($o_date) Chained Alignments
-        type chain rn3
-        html chainNet
-
-    track chainNetRn3Viewnet
-    shortLabel Net
-    view net
-    visibility full
-    parent chainNetRn3
-
-        track netRn3
-        parent chainNetRn3Viewnet
-        subGroups view=net
-        shortLabel $o_Organism Net
-        longLabel $o_Organism ($o_date) Alignment Net
-        type netAlign rn3 chainRn3
-        html chainNet
-
 track chainNetCriGri1
 compositeTrack on
 shortLabel $o_Organism Chain/Net
 longLabel $o_Organism ($o_date), Chain and Net Alignments
 subGroup1 view Views chain=Chain net=Net
 dragAndDrop subTracks
 visibility hide
 group compGeno
 noInherit on
 priority 370.3
 color 0,0,0
 altColor 100,50,0
 type bed 3
 sortOrder view=+
 matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91